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Systematic Functional Characterization Of Human 21st Chromosome Orthologs In Caenorhabditis elegans

Sarah Nordquist, Sofia R Smith, Jonathan Pierce
doi: https://doi.org/10.1101/136911
Sarah Nordquist
University of Texas at Austin
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Sofia R Smith
University of Texas at Austin
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Jonathan Pierce
University of Texas at Austin
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  • For correspondence: jonps@austin.utexas.edu
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Abstract

Individuals with Down syndrome have neurological and muscle impairments due to an additional copy of the human 21st chromosome (HSA21). Only a few of ~200 HSA21 genes encoding protein have been linked to specific Down syndrome phenotypes, while the remainder are understudied. To identify poorly characterized HSA21 genes required for nervous system function, we studied behavioral phenotypes caused by loss-of-function mutations in conserved HSA21 orthologs in the nematode Caenorhabditis elegans. We identified ten HSA21 orthologs that are required for neuromuscular behaviors: cle-1 (COL18A1), cysl-2 (CBS), dnsn-1 (DONSON), eva-1 (EVA1C), mtq-2 (N6ATM1), ncam-1 (NCAM2), pad-2 (POFUT2), pdxk-1 (PDXK), rnt-1 (RUNX1), and unc-26 (SYNJ1). We also found that three of these genes are required for normal release of the neurotransmitter acetylcholine. This includes a known synaptic gene unc-26 (SYNJ1), as well as uncharacterized genes pdxk-1 (PDXK) and mtq-2 (N6ATM1). As the first systematic functional analysis of HSA21 orthologs, this study may serve as a platform to understand genes that underlie phenotypes associated with Down syndrome.

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The copyright holder for this preprint is the author/funder. It is made available under a CC-BY-NC-ND 4.0 International license.
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  • Posted January 4, 2018.

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Systematic Functional Characterization Of Human 21st Chromosome Orthologs In Caenorhabditis elegans
Sarah Nordquist, Sofia R Smith, Jonathan Pierce
bioRxiv 136911; doi: https://doi.org/10.1101/136911
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Systematic Functional Characterization Of Human 21st Chromosome Orthologs In Caenorhabditis elegans
Sarah Nordquist, Sofia R Smith, Jonathan Pierce
bioRxiv 136911; doi: https://doi.org/10.1101/136911

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