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USP7 cooperates with NOTCH1 to drive the oncogenic transcriptional program in T cell leukemia

View ORCID ProfilePanagiotis Ntziachristos, Kelly Arcipowski, Qi Jin, Carlos Alberto Martinez, Yixing Zhu, Blanca Teresa Gutierrez Diaz, Kenneth Wang, Megan Johnson, Andrew Guerin Volk, Feng Wang, Jian wu, Hui Wang, Ivan Sokirniy, Paul Thomas, Young Ah Goo, Nebiyu Abshiru, Nobuko Hijiya, Sofie Peirs, Niels Vandamme, Geert Berx, Steven Goosens, Stacy Ann Marshall, Emily Jane Randleman, Yoh-hei Takahashi, Lu Wang, Elizabeth Bartom, Clayton Collings, Pieter Van Vlierberghe, Alexandros strikoudis, Stephen kelly, Beatrix Ueberheide, Christine Mantis, Irawati Kandela, Jean-Pierre Bourquin, Beat Bornhauser, Valentina Serafin, Silvia Bresolin, Maddalena Paganin, Benedetta Accordi, Giuseppe Basso, Neil L. Kelleher, Joseph Weinstock, Suresh Kumar, John D. Crispino, Ali Shilatifard
doi: https://doi.org/10.1101/248427
Panagiotis Ntziachristos
Northwestern University;
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  • ORCID record for Panagiotis Ntziachristos
  • For correspondence: panos.ntz@northwestern.edu
Kelly Arcipowski
Northwestern University;
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Qi Jin
Northwestern University;
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Carlos Alberto Martinez
Northwestern University;
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Yixing Zhu
Northwestern University;
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Blanca Teresa Gutierrez Diaz
Northwestern University;
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Kenneth Wang
Northwestern University;
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Megan Johnson
Northwestern University;
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Andrew Guerin Volk
Northwestern University;
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Feng Wang
Progenra Inc.;
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Jian wu
Progenra Inc.;
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Hui Wang
Progenra Inc.;
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Ivan Sokirniy
Progenra Inc.;
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Paul Thomas
Northwestern University;
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Young Ah Goo
Northwestern University;
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Nebiyu Abshiru
Northwestern University;
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Nobuko Hijiya
Northwestern University;
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Sofie Peirs
Ghent University Hospital;
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Niels Vandamme
Ghent University Hospital;
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Geert Berx
Ghent University Hospital;
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Steven Goosens
Ghent University Hospital;
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Stacy Ann Marshall
Northwestern University;
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Emily Jane Randleman
Northwestern University;
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Yoh-hei Takahashi
Northwestern University;
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Lu Wang
Northwestern University;
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Elizabeth Bartom
Northwestern University;
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Clayton Collings
Northwestern University;
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Pieter Van Vlierberghe
Ghent University Hospital;
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Alexandros strikoudis
New York University;
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Stephen kelly
New York University;
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Beatrix Ueberheide
New York University;
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Christine Mantis
Northwestern University;
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Irawati Kandela
Northwestern University;
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Jean-Pierre Bourquin
University of Zurich;
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Beat Bornhauser
University of Zurich;
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Valentina Serafin
University of Padova
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Silvia Bresolin
University of Padova
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Maddalena Paganin
University of Padova
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Benedetta Accordi
University of Padova
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Giuseppe Basso
University of Padova
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Neil L. Kelleher
Northwestern University;
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Joseph Weinstock
Progenra Inc.;
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Suresh Kumar
Progenra Inc.;
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John D. Crispino
Northwestern University;
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Ali Shilatifard
Northwestern University;
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Abstract

T-cell acute lymphoblastic leukemia (T-ALL) is an aggressive disease, affecting children and adults. Treatments show high response rates but have debilitating effects and carry risk of relapse. Previous work implicated NOTCH1 and other oncogenes. However, direct inhibition of these pathways affects healthy tissues and cancer alike. Here, we demonstrate that ubiquitin-specific protease 7 (USP7) controls leukemia growth by stabilizing the levels of the NOTCH1 and JMJD3 demethylase. USP7 is overexpressed T-ALL and is transcriptionally regulated by NOTCH1. In turn, USP7 controls NOTCH1 through deubiquitination. USP7 is bound to oncogenic targets and controls gene expression through H2B ubiquitination and H3K27me3 changes via stabilization of NOTCH1 and JMJD3. We also show that USP7 and NOTCH1 bind T-ALL superenhancers, and USP7 inhibition alters associated gene activity. These results provide a new model for deubiquitinase activity through recruitment to oncogenic chromatin loci and regulation of both oncogenic transcription factors and chromatin marks to promote leukemia. USP7 inhibition significantly blocked T-ALL cell growth in vitro and in vivo. Our studies also show that USP7 is upregulated in the aggressive high-risk cases of T-ALL and suggest that USP7 expression might be a prognostic marker in ALL and its inhibition could be a therapeutic tool against aggressive leukemia.

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  • Posted January 16, 2018.

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USP7 cooperates with NOTCH1 to drive the oncogenic transcriptional program in T cell leukemia
Panagiotis Ntziachristos, Kelly Arcipowski, Qi Jin, Carlos Alberto Martinez, Yixing Zhu, Blanca Teresa Gutierrez Diaz, Kenneth Wang, Megan Johnson, Andrew Guerin Volk, Feng Wang, Jian wu, Hui Wang, Ivan Sokirniy, Paul Thomas, Young Ah Goo, Nebiyu Abshiru, Nobuko Hijiya, Sofie Peirs, Niels Vandamme, Geert Berx, Steven Goosens, Stacy Ann Marshall, Emily Jane Randleman, Yoh-hei Takahashi, Lu Wang, Elizabeth Bartom, Clayton Collings, Pieter Van Vlierberghe, Alexandros strikoudis, Stephen kelly, Beatrix Ueberheide, Christine Mantis, Irawati Kandela, Jean-Pierre Bourquin, Beat Bornhauser, Valentina Serafin, Silvia Bresolin, Maddalena Paganin, Benedetta Accordi, Giuseppe Basso, Neil L. Kelleher, Joseph Weinstock, Suresh Kumar, John D. Crispino, Ali Shilatifard
bioRxiv 248427; doi: https://doi.org/10.1101/248427
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USP7 cooperates with NOTCH1 to drive the oncogenic transcriptional program in T cell leukemia
Panagiotis Ntziachristos, Kelly Arcipowski, Qi Jin, Carlos Alberto Martinez, Yixing Zhu, Blanca Teresa Gutierrez Diaz, Kenneth Wang, Megan Johnson, Andrew Guerin Volk, Feng Wang, Jian wu, Hui Wang, Ivan Sokirniy, Paul Thomas, Young Ah Goo, Nebiyu Abshiru, Nobuko Hijiya, Sofie Peirs, Niels Vandamme, Geert Berx, Steven Goosens, Stacy Ann Marshall, Emily Jane Randleman, Yoh-hei Takahashi, Lu Wang, Elizabeth Bartom, Clayton Collings, Pieter Van Vlierberghe, Alexandros strikoudis, Stephen kelly, Beatrix Ueberheide, Christine Mantis, Irawati Kandela, Jean-Pierre Bourquin, Beat Bornhauser, Valentina Serafin, Silvia Bresolin, Maddalena Paganin, Benedetta Accordi, Giuseppe Basso, Neil L. Kelleher, Joseph Weinstock, Suresh Kumar, John D. Crispino, Ali Shilatifard
bioRxiv 248427; doi: https://doi.org/10.1101/248427

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