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Ancient genomes document multiple waves of migration in Southeast Asian prehistory

Mark Lipson, Olivia Cheronet, Swapan Mallick, Nadin Rohland, Marc Oxenham, Michael Pietrusewsky, Thomas Oliver Pryce, Anna Willis, Hirofumi Matsumura, Hallie Buckley, Kate Domett, Giang Hai Nguyen, Hoang Hiep Trinh, Aung Aung Kyaw, Tin Tin Win, Baptiste Pradier, Nasreen Broomandkhoshbacht, Francesca Candilio, Piya Changmai, Daniel Fernandes, Matthew Ferry, Beatriz Gamarra, Eadaoin Harney, Jatupol Kampuansai, Wibhu Kutanan, Megan Michel, Mario Novak, Jonas Oppenheimer, Kendra Sirak, Kristin Stewardson, Zhao Zhang, Pavel Flegontov, Ron Pinhasi, David Reich
doi: https://doi.org/10.1101/279646
Mark Lipson
Harvard Medical School;
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  • For correspondence: mark.lipson@gmail.com
Olivia Cheronet
University of Vienna;
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Swapan Mallick
Harvard Medical School;
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Nadin Rohland
Harvard Medical School;
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Marc Oxenham
Australian National University;
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Michael Pietrusewsky
University of Hawai'i at Mānoa;
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Thomas Oliver Pryce
Centre National de la Recherche Scientifique;
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Anna Willis
James Cook University;
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Hirofumi Matsumura
Sapporo Medical University;
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Hallie Buckley
University of Otago;
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Kate Domett
James Cook University;
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Giang Hai Nguyen
Vietnam Institute of Archaeology;
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Hoang Hiep Trinh
Vietnam Institute of Archaeology;
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Aung Aung Kyaw
Ministry of Religious Affairs and Culture, Myanmar;
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Tin Tin Win
Ministry of Religious Affairs and Culture, Myanmar;
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Baptiste Pradier
Université Paris Nanterre;
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Nasreen Broomandkhoshbacht
Harvard Medical School;
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Francesca Candilio
University of Pennsylvania Museum of Archaeology and Anthropology;
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Piya Changmai
University of Ostrava;
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Daniel Fernandes
University of Vienna;
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Matthew Ferry
Harvard Medical School;
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Beatriz Gamarra
University College Dublin;
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Eadaoin Harney
Harvard Medical School;
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Jatupol Kampuansai
Chiang Mai University;
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Wibhu Kutanan
Khon Kaen University
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Megan Michel
Harvard Medical School;
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Mario Novak
University College Dublin;
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Jonas Oppenheimer
Harvard Medical School;
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Kendra Sirak
University College Dublin;
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Kristin Stewardson
Harvard Medical School;
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Zhao Zhang
Harvard Medical School;
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Pavel Flegontov
University of Ostrava;
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Ron Pinhasi
University of Vienna;
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David Reich
Harvard Medical School;
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Abstract

Southeast Asia is home to rich human genetic and linguistic diversity, but the details of past population movements in the region are not well known. Here, we report genome-wide ancient DNA data from thirteen Southeast Asian individuals spanning from the Neolithic period through the Iron Age (4100-1700 years ago). Early agriculturalists from Man Bac in Vietnam possessed a mixture of East Asian (southern Chinese farmer) and deeply diverged eastern Eurasian (hunter-gatherer) ancestry characteristic of Austroasiatic speakers, with similar ancestry as far south as Indonesia providing evidence for an expansive initial spread of Austroasiatic languages. In a striking parallel with Europe, later sites from across the region show closer connections to present-day majority groups, reflecting a second major influx of migrants by the time of the Bronze Age.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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  • Posted March 10, 2018.

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Ancient genomes document multiple waves of migration in Southeast Asian prehistory
Mark Lipson, Olivia Cheronet, Swapan Mallick, Nadin Rohland, Marc Oxenham, Michael Pietrusewsky, Thomas Oliver Pryce, Anna Willis, Hirofumi Matsumura, Hallie Buckley, Kate Domett, Giang Hai Nguyen, Hoang Hiep Trinh, Aung Aung Kyaw, Tin Tin Win, Baptiste Pradier, Nasreen Broomandkhoshbacht, Francesca Candilio, Piya Changmai, Daniel Fernandes, Matthew Ferry, Beatriz Gamarra, Eadaoin Harney, Jatupol Kampuansai, Wibhu Kutanan, Megan Michel, Mario Novak, Jonas Oppenheimer, Kendra Sirak, Kristin Stewardson, Zhao Zhang, Pavel Flegontov, Ron Pinhasi, David Reich
bioRxiv 279646; doi: https://doi.org/10.1101/279646
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Ancient genomes document multiple waves of migration in Southeast Asian prehistory
Mark Lipson, Olivia Cheronet, Swapan Mallick, Nadin Rohland, Marc Oxenham, Michael Pietrusewsky, Thomas Oliver Pryce, Anna Willis, Hirofumi Matsumura, Hallie Buckley, Kate Domett, Giang Hai Nguyen, Hoang Hiep Trinh, Aung Aung Kyaw, Tin Tin Win, Baptiste Pradier, Nasreen Broomandkhoshbacht, Francesca Candilio, Piya Changmai, Daniel Fernandes, Matthew Ferry, Beatriz Gamarra, Eadaoin Harney, Jatupol Kampuansai, Wibhu Kutanan, Megan Michel, Mario Novak, Jonas Oppenheimer, Kendra Sirak, Kristin Stewardson, Zhao Zhang, Pavel Flegontov, Ron Pinhasi, David Reich
bioRxiv 279646; doi: https://doi.org/10.1101/279646

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