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Open source tools for temporally controlled rodent behavior suitable for electrophysiology and optogenetic manipulations

Nicola Solari, Katalin Sviatko, Tamas Laszlovszky, Panna Hegedus, Balazs Hangya
doi: https://doi.org/10.1101/243469
Nicola Solari
Institute of Experimental Medicine
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Katalin Sviatko
Institute of Experimental Medicine
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Tamas Laszlovszky
Institute of Experimental Medicine
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Panna Hegedus
Institute of Experimental Medicine
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Balazs Hangya
Institute of Experimental Medicine
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  • For correspondence: hangyab@koki.hu
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Abstract

Understanding how the brain controls behavior requires observing and manipulating neural activity in awake behaving animals. Neuronal firing is timed at millisecond precision. Therefore, to decipher temporal coding, it is necessary to monitor and control animal behavior at the same level of temporal accuracy. However, it is technically challenging to deliver sensory stimuli and reinforcers as well as to read the behavioral responses they elicit with millisecond precision. Presently available commercial systems often excel in specific aspects of behavior control, but they do not provide a customizable environment allowing flexible experimental design while maintaining high standards for temporal control necessary for interpreting neuronal activity. Moreover, delay measurements of stimulus and reinforcement delivery are largely unavailable. We combined microcontroller-based behavior control with a sound delivery system for playing complex acoustic stimuli, fast solenoid valves for precisely timed reinforcement delivery and a custom-built sound attenuated chamber using high-end industrial insulation materials. Together this setup provides a physical environment to train head-fixed animals, enables calibrated sound stimuli and precisely timed fluid and air puff presentation as reinforcers. We provide latency measurements for stimulus and reinforcement delivery and an algorithm to perform such measurements on other behavior control systems. Combined with electrophysiology and optogenetic manipulations, the millisecond timing accuracy will help interpret temporally precise neural signals and behavioral changes. Additionally, since software and hardware provided here can be readily customized to achieve a large variety of paradigms, these solutions enable an unusually flexible design of rodent behavioral experiments.

Copyright 
The copyright holder for this preprint is the author/funder. It is made available under a CC-BY-NC 4.0 International license.
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  • Posted April 24, 2018.

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Open source tools for temporally controlled rodent behavior suitable for electrophysiology and optogenetic manipulations
Nicola Solari, Katalin Sviatko, Tamas Laszlovszky, Panna Hegedus, Balazs Hangya
bioRxiv 243469; doi: https://doi.org/10.1101/243469
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Open source tools for temporally controlled rodent behavior suitable for electrophysiology and optogenetic manipulations
Nicola Solari, Katalin Sviatko, Tamas Laszlovszky, Panna Hegedus, Balazs Hangya
bioRxiv 243469; doi: https://doi.org/10.1101/243469

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