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souporcell: Robust clustering of single cell RNAseq by genotype and ambient RNA inference without reference genotypes
View ORCID ProfileHaynes Heaton, View ORCID ProfileArthur M. Talman, Andrew Knights, Maria Imaz, View ORCID ProfileDaniel Gaffney, View ORCID ProfileRichard Durbin, View ORCID ProfileMartin Hemberg, View ORCID ProfileMara Lawniczak
doi: https://doi.org/10.1101/699637
Haynes Heaton
1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK
Arthur M. Talman
2MIVEGEC, IRD, CNRS, University of Montpellier, Montpellier, France
Andrew Knights
1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK
Maria Imaz
1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK
4BHF Cardiovascular Epidemiology Unit, Department of Public Health and Primary Care, University of Cambridge, Strangeways Research Laboratory, Cambridge CB1 8RN, UK
Daniel Gaffney
1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK
Richard Durbin
3University of Cambridge, Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK
Martin Hemberg
1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK
Mara Lawniczak
1Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton CB10 1SA, UK
Posted September 10, 2019.
souporcell: Robust clustering of single cell RNAseq by genotype and ambient RNA inference without reference genotypes
Haynes Heaton, Arthur M. Talman, Andrew Knights, Maria Imaz, Daniel Gaffney, Richard Durbin, Martin Hemberg, Mara Lawniczak
bioRxiv 699637; doi: https://doi.org/10.1101/699637
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