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DeepMosaic: Control-independent mosaic single nucleotide variant detection using deep convolutional neural networks
View ORCID ProfileXiaoxu Yang, Xin Xu, View ORCID ProfileMartin W. Breuss, View ORCID ProfileDanny Antaki, Laurel L. Ball, View ORCID ProfileChanguk Chung, Chen Li, View ORCID ProfileRenee D. George, View ORCID ProfileYifan Wang, View ORCID ProfileTaejeoing Bae, View ORCID ProfileAlexej Abyzov, View ORCID ProfileLiping Wei, View ORCID ProfileJonathan Sebat, NIMH Brain Somatic Mosaicism Network, View ORCID ProfileJoseph G. Gleeson
doi: https://doi.org/10.1101/2020.11.14.382473
Xiaoxu Yang
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Xin Xu
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Martin W. Breuss
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
3Department of Pediatrics, Section of Genetics and Metabolism, University of Colorado School of Medicine, Aurora, CO, USA
Danny Antaki
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Laurel L. Ball
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Changuk Chung
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Chen Li
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Renee D. George
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Yifan Wang
4Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA
Taejeoing Bae
4Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA
Alexej Abyzov
4Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA
Liping Wei
5Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China
Jonathan Sebat
6Beyster Center for Genomics of Psychiatric Diseases, University of California, San Diego, La Jolla, CA, USA
7Department of Psychiatry, University of California, San Diego, La Jolla, CA, USA
8Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA, USA
9Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA
Joseph G. Gleeson
1Department of Neurosciences, University of California, San Diego, La Jolla, CA, USA
2Rady Children’s Institute for Genomic Medicine, San Diego, CA, USA
Posted April 02, 2021.
DeepMosaic: Control-independent mosaic single nucleotide variant detection using deep convolutional neural networks
Xiaoxu Yang, Xin Xu, Martin W. Breuss, Danny Antaki, Laurel L. Ball, Changuk Chung, Chen Li, Renee D. George, Yifan Wang, Taejeoing Bae, Alexej Abyzov, Liping Wei, Jonathan Sebat, NIMH Brain Somatic Mosaicism Network, Joseph G. Gleeson
bioRxiv 2020.11.14.382473; doi: https://doi.org/10.1101/2020.11.14.382473
DeepMosaic: Control-independent mosaic single nucleotide variant detection using deep convolutional neural networks
Xiaoxu Yang, Xin Xu, Martin W. Breuss, Danny Antaki, Laurel L. Ball, Changuk Chung, Chen Li, Renee D. George, Yifan Wang, Taejeoing Bae, Alexej Abyzov, Liping Wei, Jonathan Sebat, NIMH Brain Somatic Mosaicism Network, Joseph G. Gleeson
bioRxiv 2020.11.14.382473; doi: https://doi.org/10.1101/2020.11.14.382473
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