New Results
REViewer: Haplotype-resolved visualization of read alignments in and around tandem repeats
View ORCID ProfileEgor Dolzhenko, View ORCID ProfileBen Weisburd, Kristina Ibanez Garikano, Indhu Shree Rajan Babu, View ORCID ProfileMark F Bennett, Kimberley Billingsley, Ashley Carroll, Matt C. Danzi, Viraj Deshpande, View ORCID ProfileJinhui Ding, Sarah Fazal, View ORCID ProfileAndreas Halman, Bharati Jadhav, Yunjiang Qiu, Phillip Richmond, Konrad Scheffler, Joke J.F.A van Vugt, Ramona R.A.J. Zwamborn, Genomics England Research Consortium, Samuel S. Chong, Jan M. Friedman, Arianna Tucci, Heidi L. Rehm, View ORCID ProfileMichael A Eberle
doi: https://doi.org/10.1101/2021.10.20.465046
Egor Dolzhenko
1Illumina Inc., San Diego, CA 92122, USA
Ben Weisburd
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, USA
3Center for Genomic Medicine, Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, USA
Kristina Ibanez Garikano
4William Harvey Research Institute, Queen Mary University of London, London, EC1M 6BQ, UK
Indhu Shree Rajan Babu
5Department of Medical Genetics, University of British Columbia and Children’s & Women’s Hospital, Vancouver, BC, V6H3N1, Canada
6Department of Medical and Molecular Genetics, King’s College London, Strand, London, WC2R 2LS, UK
Mark F Bennett
7Population Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Parkville, Victoria 3052, Australia
8Department of Medical Biology, University of Melbourne, Parkville, Victoria 3052, Australia
9Epilepsy Research Centre, Department of Medicine, University of Melbourne, Austin Health, Heidelberg, Victoria 3084, Australia
Kimberley Billingsley
10Center for Alzheimer’s and Related Dementias, National Institute on Aging, Bethesda, Maryland, USA
11Laboratory of Neurogenetics, National Institute on Aging, Bethesda, Maryland, USA
Ashley Carroll
1Illumina Inc., San Diego, CA 92122, USA
Matt C. Danzi
12Dr. John T. Macdonald Foundation Department of Human Genetics and John P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL 33136, USA
Viraj Deshpande
1Illumina Inc., San Diego, CA 92122, USA
Jinhui Ding
13Computational Biology Group, Laboratory of Neurogenetics, National Institute on Aging, NIH, Bethesda, Maryland, MD 20892, USA
Sarah Fazal
12Dr. John T. Macdonald Foundation Department of Human Genetics and John P. Hussman Institute for Human Genomics, University of Miami, Miller School of Medicine, Miami, FL 33136, USA
Andreas Halman
14Peter MacCallum Cancer Centre, Melbourne, Victoria 3000, Australia
15Sir Peter MacCallum Department of Oncology, The University of Melbourne, Victoria 3010, Australia
Bharati Jadhav
16Department of Genetics and Genomic Sciences and Mindich Child Health and Development Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA
Yunjiang Qiu
1Illumina Inc., San Diego, CA 92122, USA
Phillip Richmond
17BC Children’s Hospital Research Institute, Vancouver, BC, V5Z 4H4, Canada
Konrad Scheffler
1Illumina Inc., San Diego, CA 92122, USA
Joke J.F.A van Vugt
18Department of Neurology, University Medical Center Utrecht Brain Center, Utrecht University, Utrecht, The Netherlands
Ramona R.A.J. Zwamborn
18Department of Neurology, University Medical Center Utrecht Brain Center, Utrecht University, Utrecht, The Netherlands
19Genomics England, Queen Mary University of London, Charterhouse Square, London, EC1M 6BQ, UK
Samuel S. Chong
20Department of Pediatrics, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 119228, Singapore
21Department of Obstetrics and Gynecology, Yong Loo Lin School of Medicine, National University of Singapore, Singapore 119228, Singapore
22Department of Laboratory Medicine, National University Hospital, Singapore 119074, Singapore
Jan M. Friedman
5Department of Medical Genetics, University of British Columbia and Children’s & Women’s Hospital, Vancouver, BC, V6H3N1, Canada
Arianna Tucci
4William Harvey Research Institute, Queen Mary University of London, London, EC1M 6BQ, UK
Heidi L. Rehm
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, USA
3Center for Genomic Medicine, Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, USA
Michael A Eberle
1Illumina Inc., San Diego, CA 92122, USA
Posted October 21, 2021.
REViewer: Haplotype-resolved visualization of read alignments in and around tandem repeats
Egor Dolzhenko, Ben Weisburd, Kristina Ibanez Garikano, Indhu Shree Rajan Babu, Mark F Bennett, Kimberley Billingsley, Ashley Carroll, Matt C. Danzi, Viraj Deshpande, Jinhui Ding, Sarah Fazal, Andreas Halman, Bharati Jadhav, Yunjiang Qiu, Phillip Richmond, Konrad Scheffler, Joke J.F.A van Vugt, Ramona R.A.J. Zwamborn, Genomics England Research Consortium, Samuel S. Chong, Jan M. Friedman, Arianna Tucci, Heidi L. Rehm, Michael A Eberle
bioRxiv 2021.10.20.465046; doi: https://doi.org/10.1101/2021.10.20.465046
REViewer: Haplotype-resolved visualization of read alignments in and around tandem repeats
Egor Dolzhenko, Ben Weisburd, Kristina Ibanez Garikano, Indhu Shree Rajan Babu, Mark F Bennett, Kimberley Billingsley, Ashley Carroll, Matt C. Danzi, Viraj Deshpande, Jinhui Ding, Sarah Fazal, Andreas Halman, Bharati Jadhav, Yunjiang Qiu, Phillip Richmond, Konrad Scheffler, Joke J.F.A van Vugt, Ramona R.A.J. Zwamborn, Genomics England Research Consortium, Samuel S. Chong, Jan M. Friedman, Arianna Tucci, Heidi L. Rehm, Michael A Eberle
bioRxiv 2021.10.20.465046; doi: https://doi.org/10.1101/2021.10.20.465046
Subject Area
Subject Areas
- Biochemistry (11736)
- Bioengineering (8749)
- Bioinformatics (29186)
- Biophysics (14964)
- Cancer Biology (12086)
- Cell Biology (17403)
- Clinical Trials (138)
- Developmental Biology (9418)
- Ecology (14176)
- Epidemiology (2067)
- Evolutionary Biology (18299)
- Genetics (12235)
- Genomics (16795)
- Immunology (11863)
- Microbiology (28066)
- Molecular Biology (11582)
- Neuroscience (60936)
- Paleontology (451)
- Pathology (1870)
- Pharmacology and Toxicology (3238)
- Physiology (4956)
- Plant Biology (10423)
- Synthetic Biology (2883)
- Systems Biology (7338)
- Zoology (1650)