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Predicting Peptide HLA-II Presentation Using Immunopeptidomics, Transcriptomics and Deep Multimodal Learning
View ORCID ProfileHesham ElAbd, View ORCID ProfileMareike Wendorff, Tomas Koudelka, Christian Hentschker, Ann-Kristin Kamps, Christoph Prieß, View ORCID ProfileLars Wienbrandt, Frauke Degenhardt, Tim A. Steiert, Petra Bacher, Piyush Mathur, David Ellinghaus, Uwe Völker, Andreas Tholey, View ORCID ProfileTobias L. Lenz, Andre Franke
doi: https://doi.org/10.1101/2022.09.20.508681
Hesham ElAbd
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Mareike Wendorff
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Tomas Koudelka
2Proteomics & Bioanalytics, Institute for Experimental Medicine, University of Kiel, Kiel, 24105, Germany
Christian Hentschker
3Interfaculty Institute of Genetics and Functional Genomics, University Medicine Greifswald, Greifswald, 17489, Germany
Ann-Kristin Kamps
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
4Institute of Immunology, University of Kiel, Kiel, 24105, Germany
Christoph Prieß
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Lars Wienbrandt
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Frauke Degenhardt
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Tim A. Steiert
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Petra Bacher
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
4Institute of Immunology, University of Kiel, Kiel, 24105, Germany
Piyush Mathur
5Department of Bioscience & Bioengineering, Indian Institute of Technology, Jodhpur, 342030, India
David Ellinghaus
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Uwe Völker
5Department of Bioscience & Bioengineering, Indian Institute of Technology, Jodhpur, 342030, India
Andreas Tholey
4Institute of Immunology, University of Kiel, Kiel, 24105, Germany
Tobias L. Lenz
6Research Unit for Evolutionary Immunogenomics, Department of Biology, University of Hamburg, Hamburg, 20146, Germany
Andre Franke
1Institute of Clinical Molecular Biology, University of Kiel, Kiel, 24105, Germany
Posted September 22, 2022.
Predicting Peptide HLA-II Presentation Using Immunopeptidomics, Transcriptomics and Deep Multimodal Learning
Hesham ElAbd, Mareike Wendorff, Tomas Koudelka, Christian Hentschker, Ann-Kristin Kamps, Christoph Prieß, Lars Wienbrandt, Frauke Degenhardt, Tim A. Steiert, Petra Bacher, Piyush Mathur, David Ellinghaus, Uwe Völker, Andreas Tholey, Tobias L. Lenz, Andre Franke
bioRxiv 2022.09.20.508681; doi: https://doi.org/10.1101/2022.09.20.508681
Predicting Peptide HLA-II Presentation Using Immunopeptidomics, Transcriptomics and Deep Multimodal Learning
Hesham ElAbd, Mareike Wendorff, Tomas Koudelka, Christian Hentschker, Ann-Kristin Kamps, Christoph Prieß, Lars Wienbrandt, Frauke Degenhardt, Tim A. Steiert, Petra Bacher, Piyush Mathur, David Ellinghaus, Uwe Völker, Andreas Tholey, Tobias L. Lenz, Andre Franke
bioRxiv 2022.09.20.508681; doi: https://doi.org/10.1101/2022.09.20.508681
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