This document lists all of the objects in the data specification, and their fields. The NULL column indicates which objects can be empty (i.e. no value is provided). The column values indicates the possible values that this field can take.

Users are encouraged to contribute to the development of this data specification by suggesting improvements or changes online: https://github.com/mangal-wg/mangal-api/issues.

library(rmangal)
## Loading required package: rjson
## Loading required package: httr
## Loading required package: igraph
## Loading required package: cheddar
options(width =150)
url = "http://localhost:8000"
api = mangalapi(url)
## Error: Failed to connect to localhost port 8000: Connexion refusée
print(api$resources)
## Error: objet 'api' introuvable

Node level

Taxa

kable(whatIs(api, "taxa"), format ="markdown")
## Error: objet 'api' introuvable

Population

kable(whatIs(api, "population"), format ="markdown")
## Error: objet 'api' introuvable

Item

kable(whatIs(api, "item"), format ="markdown")
## Error: objet 'api' introuvable

Interaction level

Interaction

kable(whatIs(api, "interaction"), format ="markdown")
## Error: objet 'api' introuvable

Network

kable(whatIs(api, "network"), format ="markdown")
## Error: objet 'api' introuvable

Dataset

kable(whatIs(api, "dataset"), format ="markdown")
## Error: objet 'api' introuvable

Meta-data

Trait value

kable(whatIs(api, "trait"), format ="markdown")
## Error: objet 'api' introuvable

Environmental value

kable(whatIs(api, "environment"), format ="markdown")
## Error: objet 'api' introuvable

Reference

kable(whatIs(api, "reference"), format ="markdown")
## Error: objet 'api' introuvable

User

kable(whatIs(api, "user"), format ="markdown")
## Error: objet 'api' introuvable