PT - JOURNAL ARTICLE AU - Wen Xi Cao AU - Sarah Kabelitz AU - Meera Gupta AU - Eyan Yeung AU - Sichun Lin AU - Christiane Rammelt AU - Christian Ihling AU - Filip Pekovic AU - Timothy C. H. Low AU - Najeeb U. Siddiqui AU - Matthew H. K. Cheng AU - Stephane Angers AU - Craig A. Smibert AU - Martin Wühr AU - Elmar Wahle AU - Howard D. Lipshitz TI - Precise temporal regulation of post-transcriptional repressors is required for an orderly <em>Drosophila</em> maternal-to-zygotic transition AID - 10.1101/862490 DP - 2019 Jan 01 TA - bioRxiv PG - 862490 4099 - http://biorxiv.org/content/early/2019/12/03/862490.short 4100 - http://biorxiv.org/content/early/2019/12/03/862490.full AB - In animal embryos the maternal-to-zygotic transition (MZT) hands developmental control from maternal to zygotic gene products. We show that the maternal proteome represents over half of the protein coding capacity of the Drosophila melanogaster genome and that 2% of this proteome is rapidly degraded during the MZT. Cleared proteins include the post-transcriptional repressors Cup, Trailer hitch (TRAL), Maternal expression at 31B (ME31B), and Smaug (SMG). While the ubiquitin-proteasome system is necessary for clearance of all four repressors, distinct E3 ligase complexes target them: the C-terminal to Lis1 Homology (CTLH) complex targets Cup, TRAL and ME31B for degradation early in the MZT; the Skp/Cullin/F-box-containing (SCF) complex targets SMG at the end of the MZT. Deleting the C-terminal 233 amino acids of SMG makes the protein immune to degradation. We show that artificially persistent SMG downregulates the zygotic re-expression of mRNAs whose maternal contribution is cleared by SMG. Thus, clearance of SMG permits an orderly MZT.