PT - JOURNAL ARTICLE AU - Aurélien Barbotin AU - Iztok Urbančič AU - Silvia Galiani AU - Christian Eggeling AU - Martin Booth AU - Erdinc Sezgin TI - z-STED imaging and spectroscopy to investigate nanoscale membrane structure and dynamics AID - 10.1101/2019.12.28.889923 DP - 2019 Jan 01 TA - bioRxiv PG - 2019.12.28.889923 4099 - http://biorxiv.org/content/early/2019/12/28/2019.12.28.889923.short 4100 - http://biorxiv.org/content/early/2019/12/28/2019.12.28.889923.full AB - Super-resolution STED microcopy provides optical resolution beyond the diffraction limit. The resolution can be increased laterally (xy/2D) or axially (z/3D). 2D STED has been extensively used to elucidate the nanoscale membrane structure and dynamics, via imaging or combined with spectroscopy techniques such as fluorescence correlation spectroscopy (FCS) and spectral imaging. On the contrary, z-STED has not been used in this context. Here, we show that a combination of z-STED with FCS or spectral imaging enables us to see previously unobservable aspects of cellular membranes. We show that thanks to an axial resolution of approximately 100 nm, z-STED can be used to distinguish axially close-by membranes, early endocytic vesicles or tubular membrane structures. Combination of z-STED with FCS and spectral imaging showed diffusion dynamics and lipid organization in these structures, respectively.