RT Journal Article SR Electronic T1 Repeated evolution of circadian clock dysregulation in cavefish populations JF bioRxiv FD Cold Spring Harbor Laboratory SP 2020.01.14.906628 DO 10.1101/2020.01.14.906628 A1 Katya L. Mack A1 James B. Jaggard A1 Jenna L. Persons A1 Courtney N. Passow A1 Bethany A. Stanhope A1 Estephany Ferrufino A1 Dai Tsuchiya A1 Sarah E. Smith A1 Brian D. Slaughter A1 Johanna Kowalko A1 Nicolas Rohner A1 Alex C. Keene A1 Suzanne E. McGaugh YR 2020 UL http://biorxiv.org/content/early/2020/01/15/2020.01.14.906628.abstract AB Circadian rhythms are nearly ubiquitous throughout nature, suggesting they are critical for survival in diverse environments. Organisms inhabiting environments with arrhythmic days, such as caves, offer a unique opportunity to study the evolution of circadian rhythms in response to changing ecological pressures. Here we demonstrate that the cave environment has led to the repeated disruption of the biological clock across multiple populations of Mexican cavefish, with the circadian transcriptome showing widespread reductions in rhythmicity and changes to the timing of the activation/repression of genes in the core pacemaker. Then, we investigate the function of two genes with decreased rhythmic expression in cavefish. Mutants of these genes phenocopy reductions in sleep seen in multiple cave populations, suggesting a link between circadian dysregulation and sleep reduction. Altogether, our results reveal that evolution in an arrhythmic environment has resulted in dysregulation to the biological clock across multiple populations by diverse molecular mechanisms.