PT - JOURNAL ARTICLE AU - Ana Lima AU - Gabriele Lubatti AU - Jörg Burgstaller AU - Di Hu AU - Alistair Green AU - Aida Di Gregorio AU - Tamzin Zawadzki AU - Barbara Pernaute AU - Elmir Mahammadov AU - Marian Dore AU - Juan Miguel Sanchez AU - Sarah Bowling AU - Margarida Sancho AU - Mohammad Karimi AU - David Carling AU - Nick Jones AU - Shankar Srinivas AU - Antonio Scialdone AU - Tristan A. Rodriguez TI - Differences in mitochondrial activity trigger cell competition during early mouse development AID - 10.1101/2020.01.15.900613 DP - 2020 Jan 01 TA - bioRxiv PG - 2020.01.15.900613 4099 - http://biorxiv.org/content/early/2020/01/15/2020.01.15.900613.short 4100 - http://biorxiv.org/content/early/2020/01/15/2020.01.15.900613.full AB - Cell competition is emerging as a quality control mechanism that eliminates unfit cells in a wide range of settings from development to the adult. However, the nature of the cells normally eliminated by cell competition and what triggers their elimination remains poorly understood. Here we have performed single cell transcriptional profiling of early mouse embryos and find that the cells eliminated show the hallmarks of cell competition, are mis-patterned and have mitochondrial defects. We demonstrate that mitochondrial defects are common to a range of different loser cell types and that manipulating mitochondrial function is sufficient to trigger competition. Importantly, we show that in the embryo loser epiblast cells display mitochondrial DNA mutations and that even small changes in mitochondrial DNA sequence can influence the competitive ability of the cell. Our results therefore suggest that cell competition is a purifying selection that optimises metabolic output prior to gastrulation.