RT Journal Article SR Electronic T1 The architecture of protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit JF bioRxiv FD Cold Spring Harbor Laboratory SP 2020.02.08.939488 DO 10.1101/2020.02.08.939488 A1 Matthew L. Kraushar A1 Ferdinand Krupp A1 Paul Turko A1 Mateusz C. Ambrozkiewicz A1 Thiemo Sprink A1 Koshi Imami A1 Carlos H. Vieira-Vieira A1 Theres Schaub A1 Dermot Harnett A1 Agnieszka Münster-Wandowski A1 Jörg Bürger A1 Ulrike Zinnall A1 Ekaterina Borisova A1 Hiroshi Yamamoto A1 Mladen-Roko Rasin A1 Dieter Beule A1 Markus Landthaler A1 Thorsten Mielke A1 Victor Tarabykin A1 Imre Vida A1 Matthias Selbach A1 Christian M.T. Spahn YR 2020 UL http://biorxiv.org/content/early/2020/02/10/2020.02.08.939488.abstract AB Protein synthesis must be finely tuned in the nervous system, as it represents an essential feature of neurodevelopmental gene expression, and dominant pathology in neurological disease. However, the architecture of ribosomal complexes in the developing mammalian brain has not been analyzed at high resolution. This study investigates the architecture of ribosomes ex vivo from the embryonic and perinatal mouse neocortex, revealing Ebp1 as a 60S peptide tunnel exit binding factor at near-atomic resolution by multiparticle cryo-electron microscopy. The impact of Ebp1 on the neuronal proteome was analyzed by pSILAC and BONCAT coupled mass spectrometry, implicating Ebp1 in neurite outgrowth proteostasis, with in vivo embryonic Ebp1 knockdown resulting in dysregulation of neurite outgrowth. Our findings reveal Ebp1 as a central component of neocortical protein synthesis, and the 60S peptide tunnel exit as a focal point of gene expression control in the molecular specification of neuronal morphology.