TY - JOUR T1 - Rapid metagenomic characterization of a case of imported COVID-19 in Cambodia JF - bioRxiv DO - 10.1101/2020.03.02.968818 SP - 2020.03.02.968818 AU - Jessica E. Manning AU - Jennifer A. Bohl AU - Sreyngim Lay AU - Sophana Chea AU - Ly Sovann AU - Yi Sengdoeurn AU - Seng Heng AU - Chan Vuthy AU - Katrina Kalantar AU - Vida Ahyong AU - Michelle Tan AU - Jonathan Sheu AU - Cristina M. Tato AU - Joseph L. DeRisi AU - Laurence Baril AU - Veasna Duong AU - Philippe Dussart AU - Erik A. Karlsson Y1 - 2020/01/01 UR - http://biorxiv.org/content/early/2020/03/05/2020.03.02.968818.abstract N2 - Rapid production and publication of pathogen genome sequences during emerging disease outbreaks provide crucial public health information. In resource-limited settings, especially near an outbreak epicenter, conventional deep sequencing or bioinformatics are often challenging. Here we successfully used metagenomic next generation sequencing on an iSeq100 Illumina platform paired with an open-source bioinformatics pipeline to quickly characterize Cambodia’s first case of COVID-2019. ER -