PT - JOURNAL ARTICLE AU - David H. Brann AU - Tatsuya Tsukahara AU - Caleb Weinreb AU - Marcela Lipovsek AU - Koen Van den Berge AU - Boying Gong AU - Rebecca Chance AU - Iain C. Macaulay AU - Hsin-jung Chou AU - Russell Fletcher AU - Diya Das AU - Kelly Street AU - Hector Roux de Bezieux AU - Yoon-Gi Choi AU - Davide Risso AU - Sandrine Dudoit AU - Elizabeth Purdom AU - Jonathan S. Mill AU - Ralph Abi Hachem AU - Hiroaki Matsunami AU - Darren W. Logan AU - Bradley J. Goldstein AU - Matthew S. Grubb AU - John Ngai AU - Sandeep Robert Datta TI - Non-neuronal expression of SARS-CoV-2 entry genes in the olfactory system suggests mechanisms underlying COVID-19-associated anosmia AID - 10.1101/2020.03.25.009084 DP - 2020 Jan 01 TA - bioRxiv PG - 2020.03.25.009084 4099 - http://biorxiv.org/content/early/2020/04/09/2020.03.25.009084.short 4100 - http://biorxiv.org/content/early/2020/04/09/2020.03.25.009084.full AB - A subset of COVID-19 patients exhibit altered olfactory function. Here we analyze bulk and single cell RNA-Seq datasets to identify cell types in the olfactory epithelium and olfactory bulb that express cell entry molecules that mediate infection by SARS-CoV-2 (CoV-2), the causal agent in COVID-19. We find that samples from whole olfactory mucosa in species including mouse and human express two key genes involved in CoV-2 entry, ACE2 and TMPRSS2. However, neither olfactory sensory neurons nor olfactory bulb neurons express these genes, which are instead expressed in support cells, stem cells, and perivascular cells. These findings suggest that CoV-2 infection of non-neuronal cell types leads to anosmia and related disturbances in odor perception in COVID-19 patients.One Sentence Summary Analysis of new and previously published single-cell sequencing datasets reveals that the SARS-CoV2 receptor ACE2 is expressed in olfactory support cells, stem cells and perivascular cells — but not in neurons — suggesting mechanisms through which the COVID-19 syndrome could lead to olfactory dysfunction.Competing Interest StatementDL is an employee of Mars, Inc. None of the other authors have competing interests to declare.