PT - JOURNAL ARTICLE AU - Howden, Sara E AU - Vanslambrouck, Jessica M AU - Wilson, Sean B AU - Tan, Ker Sin AU - Little, Melissa H TI - Fate-mapping within human kidney organoids reveals conserved mammalian nephron progenitor lineage relationships AID - 10.1101/432161 DP - 2018 Jan 01 TA - bioRxiv PG - 432161 4099 - http://biorxiv.org/content/early/2018/10/01/432161.short 4100 - http://biorxiv.org/content/early/2018/10/01/432161.full AB - While mammalian kidney morphogenesis has been well documented, human kidney development is poorly understood. Here we combine reprogramming, CRISPR/Cas9 gene-editing and organoid technologies to study human nephron lineage relationships in vitro. Early kidney organoids contained a SIX2+ population with a transcriptional profile akin to human nephron progenitors. Lineage-tracing using gene-edited induced pluripotent stem cell (iPSC) lines revealed that SIX2-expressing cells contribute to nephron formation but not to the putative collecting duct epithelium. However, Cre-mediated temporal induction of the SIX2+ lineage revealed a declining capacity for these cells to contribute to nephron formation over time. This suggests human kidney organoids, unlike the developing kidney in vivo, lack a nephron progenitor niche capable of both self-renewal and ongoing nephrogenesis. Nonetheless, human iPSC-derived kidney tissue maintains previously identified lineage relationships supporting the utility of pluripotent stem cell-derived kidney organoids for interrogating the molecular and cellular basis of early human development.