RT Journal Article SR Electronic T1 Automatic subtyping of individuals with Primary Progressive Aphasia JF bioRxiv FD Cold Spring Harbor Laboratory SP 2020.04.04.025593 DO 10.1101/2020.04.04.025593 A1 Charalambos Themistocleous A1 Bronte Ficek A1 Kimberly Webster A1 Dirk-Bart den Ouden A1 Argye E. Hillis A1 Kyrana Tsapkini YR 2020 UL http://biorxiv.org/content/early/2020/06/28/2020.04.04.025593.abstract AB Background The classification of patients with Primary Progressive Aphasia (PPA) into variants is time-consuming, costly, and requires combined expertise by clinical neurologists, neuropsychologists, speech pathologists, and radiologists.Objective The aim of the present study is to determine whether acoustic and linguistic variables provide accurate classification of PPA patients into one of three variants: nonfluent PPA, semantic PPA, and logopenic PPA.Methods In this paper, we present a machine learning model based on Deep Neural Networks (DNN) for the subtyping of patients with PPA into three main variants, using combined acoustic and linguistic information elicited automatically via acoustic and linguistic analysis. The performance of the DNN was compared to the classification accuracy of Random Forests, Support Vector Machines, and Decision Trees, as well as expert clinicians’ classifications.Results The DNN model outperformed the other machine learning models with 80% classification accuracy, providing reliable subtyping of patients with PPA into variants and it even outperformed auditory classification of patients into variants by clinicians.Conclusions We show that the combined speech and language markers from connected speech productions provide information about symptoms and variant subtyping in PPA. The end-to-end automated machine learning approach we present can enable clinicians and researchers to provide an easy, quick and inexpensive classification of patients with PPA.Competing Interest StatementThe authors have declared no competing interest.