PT - JOURNAL ARTICLE AU - Sisu Han AU - Grey A Wilkinson AU - Satoshi Okawa AU - Lata Adnani AU - Rajiv Dixit AU - Imrul Faisal AU - Matthew Brooks AU - Veronique Cortay AU - Vorapin Chinchalongporn AU - Dawn Zinyk AU - Saiqun Li AU - Jinghua Gao AU - Faizan Malik AU - Yacine Touahri AU - Vladimir Espinosa Angarica AU - Ana-Maria Oproescu AU - Eko Raharjo AU - Yaroslav Ilnytskyy AU - Jung-Woong Kim AU - Wei Wu AU - Waleed Rahmani AU - Igor Kovalchuk AU - Jennifer Ai-wen Chan AU - Deborah Kurrasch AU - Diogo S. Castro AU - Colette Dehay AU - Anand Swaroop AU - Jeff Biernaskie AU - Antonio del Sol AU - Carol Schuurmans TI - Proneural genes define ground state rules to regulate neurogenic patterning and cortical folding AID - 10.1101/2020.09.22.307058 DP - 2020 Jan 01 TA - bioRxiv PG - 2020.09.22.307058 4099 - http://biorxiv.org/content/early/2020/09/22/2020.09.22.307058.short 4100 - http://biorxiv.org/content/early/2020/09/22/2020.09.22.307058.full AB - Transition from smooth, lissencephalic brains to highly-folded, gyrencephalic structures is associated with neuronal expansion and breaks in neurogenic symmetry. Here we show that Neurog2 and Ascl1 proneural genes regulate cortical progenitor cell differentiation through cross-repressive interactions to sustain neurogenic continuity in a lissencephalic rodent brain. Using in vivo lineage tracing, we found that Neurog2 and Ascl1 expression defines a lineage continuum of four progenitor pools, with ‘double+ progenitors’ displaying several unique features (least lineage-restricted, complex gene regulatory network, G2 pausing). Strikingly, selective killing of double+ progenitors using split-Cre;Rosa-DTA transgenics breaks neurogenic symmetry by locally disrupting Notch signaling, leading to cortical folding. Finally, consistent with NEUROG2 and ASCL1 driving discontinuous neurogenesis and folding in gyrencephalic species, their transcripts are modular in folded macaque cortices and pseudo-folded human cerebral organoids. Neurog2/Ascl1 double+ progenitors are thus Notch-ligand expressing ‘niche’ cells that control neurogenic periodicity to determine cortical gyrification.HIGHLIGHTSNeurog2 and Ascl1 expression defines four distinct transitional progenitor statesDouble+ NPCs are transcriptionally complex and mark a lineage branch pointDouble+ NPCs control neurogenic patterning and cortical folding via Notch signalingNeurog2 and Ascl1 expression is modular in folded and not lissencephalic corticeseTOC BLURB Emergence of a gyrencephalic cortex is associated with a break in neurogenic continuity across the cortical germinal zone. Han et al. identify a pool of unbiased neural progenitors at a lineage bifurcation point that co-express Neurog2 and Ascl1 and produce Notch ligands to control neurogenic periodicity and cortical folding.Competing Interest StatementThe authors have declared no competing interest.