PT  - JOURNAL ARTICLE
AU  - Timothy S. Jarvela
AU  - Kriti Chaplot
AU  - Iris Lindberg
TI  - A protease protection assay for the detection of internalized alpha-synuclein pre-formed fibrils
AID  - 10.1101/2020.10.12.335885
DP  - 2020 Jan 01
TA  - bioRxiv
PG  - 2020.10.12.335885
4099  - http://biorxiv.org/content/early/2020/10/12/2020.10.12.335885.short
4100  - http://biorxiv.org/content/early/2020/10/12/2020.10.12.335885.full
AB  - Alpha-synuclein pre-formed fibrils (PFFs) represent a promising model system for the study of cellular processes underlying cell-to-cell transmission of α-synuclein proteopathic aggregates. However, the ability to differentiate the fate of internalized PFFs from those which remain in the extracellular environment remains limited due to the propensity for PFFs to adhere to the cell surface. Removal of PFFs requires repeated washing and/or specific quenching of extracellular fluorescent PFF signals. In this paper we present a new method for analyzing the fate of internalized α-synuclein. We inserted a tobacco etch virus (TEV) protease cleavage site between α-synuclein and green fluorescent protein. As the TEV protease is highly specific, non-toxic, and active under physiological conditions, we are able to use protection from TEV cleavage to distinguish internalized PFFs from those which remain attached to the cell surface. Using this experimental paradigm, downstream intracellular events can be analyzed via live or fixed cell microscopy as well as by Western blotting. We suggest that this method will be useful for understanding the fate of PFFs after endocytosis under various experimental manipulations.