RT Journal Article
SR Electronic
T1 Same role but different actors: genetic regulation of post-translational modification of two distinct proteins
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 2021.05.04.442584
DO 10.1101/2021.05.04.442584
A1 Arianna Landini
A1 Irena Trbojević-Akmačić
A1 Pau Navarro
A1 Yakov A. Tsepilov
A1 Sodbo Z. Sharapov
A1 Frano Vučković
A1 Ozren Polašek
A1 Caroline Hayward
A1 Tea Petrovic
A1 Marija Vilaj
A1 Yurii S. Aulchenko
A1 Gordan Lauc
A1 James F. Wilson
A1 Lucija Klarić
YR 2021
UL http://biorxiv.org/content/early/2021/05/04/2021.05.04.442584.abstract
AB Post-translational modifications (PTMs) diversify protein functions and dynamically coordinate their signalling networks, influencing most aspects of cell physiology. Nevertheless, their genetic regulation or influence on complex traits is not fully understood. Here, we compare for the first time the genetic regulation of the same PTM of two proteins – glycosylation of transferrin and immunoglobulin G (IgG). By performing genome-wide association analysis of transferrin glycosylation, we identified 10 significantly associated loci, all novel. Comparing these with IgG glycosylation-associated genes, we note protein-specific associations with genes encoding glycosylation enzymes (transferrin - MGAT5, ST3GAL4, B3GAT1; IgG - MGAT3, ST6GAL1) as well as shared associations (FUT6, FUT8). Colocalisation analyses of the latter suggest that different causal variants in the FUT genes regulate fucosylation of the two proteins. We propose that they affect the binding of different transcription factors in different tissues, with fucosylation of IgG being regulated by IKZF1 in B-cells and of transferrin by HNF1A in liver.Competing Interest StatementG.L. is the founder and owner of Genos Ltd, a private research organization that specializes in high-throughput glycomic analysis and has several patents in this field. I.T.-A., F.V., T.P., and M.V. are employees of Genos Ltd. Y.S.A. is a founder and a co-owner of PolyOmica and PolyKnomics, private organizations providing services, research and development in the field of computational and statistical genomics.