RT Journal Article
SR Electronic
T1 RevGadgets: an R Package for visualizing Bayesian phylogenetic analyses from RevBayes
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 2021.05.10.443470
DO 10.1101/2021.05.10.443470
A1 Tribble, Carrie M.
A1 Freyman, William A.
A1 Landis, Michael J.
A1 Lim, Jun Ying
A1 Barido-Sottani, Joëlle
A1 Kopperud, Bjørn Tore
A1 Höhna, Sebastian
A1 May, Michael R.
YR 2021
UL http://biorxiv.org/content/early/2021/05/11/2021.05.10.443470.abstract
AB Statistical phylogenetic methods are the foundation for a wide range of evolutionary and epidemiological studies. However, as these methods grow increasingly complex, users often encounter significant challenges with summarizing, visualizing, and communicating their key results.We present RevGadgets, an R package for creating publication-quality figures from the results of a large variety of phylogenetic analyses performed in RevBayes (and other phylogenetic software packages).We demonstrate how to use RevGadgets through a set of vignettes that cover the most common use cases that researchers will encounter.RevGadgets is an open-source, extensible package that will continue to evolve in parallel with RevBayes, helping researchers to make sense of and communicate the results of a diverse array of analyses.Competing Interest StatementThe authors have declared no competing interest.