RT Journal Article SR Electronic T1 A stem-loop RNA RIG-I agonist confers prophylactic and therapeutic protection against acute and chronic SARS-CoV-2 infection in mice JF bioRxiv FD Cold Spring Harbor Laboratory SP 2021.06.16.448754 DO 10.1101/2021.06.16.448754 A1 Tianyang Mao A1 Benjamin Israelow A1 Carolina Lucas A1 Chantal B. F. Vogels A1 Olga Fedorova A1 Mallery I. Breban A1 Bridget L. Menasche A1 Huiping Dong A1 Melissa Linehan A1 Yale SARS-CoV-2 Genome Surveillance Initiative A1 Craig B. Wilen A1 Marie L. Landry A1 Nathan D. Grubaugh A1 Anna M. Pyle A1 Akiko Iwasaki YR 2021 UL http://biorxiv.org/content/early/2021/06/17/2021.06.16.448754.abstract AB As SARS-CoV-2 continues to cause morbidity and mortality around the world, there is an urgent need for the development of effective medical countermeasures. Here, we assessed the antiviral capacity of a minimal RIG-I agonist, stem-loop RNA 14 (SLR14), in viral control, disease prevention, post-infection therapy, and cross-variant protection in mouse models of SARS-CoV-2 infection. A single dose of SLR14 prevented viral replication in the lower respiratory tract and development of severe disease in a type I interferon (IFN-I) dependent manner. SLR14 demonstrated remarkable protective capacity against lethal SARS-CoV-2 infection when used prophylactically and retained considerable efficacy as a therapeutic agent. In immunodeficient mice carrying chronic SARS-CoV-2 infection, SLR14 elicited near-sterilizing innate immunity by inducing IFN-I responses in the absence of the adaptive immune system. In the context of infection with variants of concern (VOC), SLR14 conferred broad protection and uncovered an IFN-I resistance gradient across emerging VOC. These findings demonstrate the therapeutic potential of SLR14 as a host-directed, broad-spectrum antiviral for early post-exposure treatment and for treatment of chronically infected immunosuppressed patients.Competing Interest StatementA.I. served as a consultant for Spring Discovery, Boehringer Ingelheim, and Adaptive Biotechnologies. A.I., A.M.P., and T.M. filed a patent related to the manuscript as inventors (Application no.: US 2021/0102209). A.I. and A.M.P. are cofounders of RIGImmune. N.D.G. is a consultant for Tempus Labs. Yale University (C.B.W.) has a patent pending related to this work entitled Compounds and Compositions for Treating, Ameliorating, and/or Preventing SARS-CoV-2 Infection and/or Complications Thereof.