PT - JOURNAL ARTICLE AU - Martynowycz, Michael W. AU - Clabbers, Max T.B. AU - Hattne, Johan AU - Gonen, Tamir TI - Ab initio phasing macromolecular structures using electron-counted MicroED data AID - 10.1101/2021.10.16.464672 DP - 2021 Jan 01 TA - bioRxiv PG - 2021.10.16.464672 4099 - http://biorxiv.org/content/early/2021/10/17/2021.10.16.464672.short 4100 - http://biorxiv.org/content/early/2021/10/17/2021.10.16.464672.full AB - Structures of two globular proteins were determined ab initio using microcrystal electron diffraction (MicroED) data that was collected on a direct electron detector in counting mode. Microcrystals were identified using a scanning electron microscope (SEM) and thinned with a focused ion-beam (FIB) to produce crystalline lamellae of ideal thickness. Continuous rotation data were collected using an ultra-low exposure rate on a Falcon 4 direct electron detector in electron-counting mode. For the first sample, triclinic lysozyme extending to 0.87 Å resolution, an ideal helical fragment of only three alanine residues provided initial phases. These phases were improved using density modification, allowing the entire atomic structure to be built automatically. A similar approach was successful on a second macromolecular sample, proteinase K, which is much larger and diffracted to a modest 1.5 Å resolution. These results demonstrate that macromolecules can be determined to sub-Ångström resolution by MicroED and that ab initio phasing can be successfully applied to counting data collected on a direct electron detector.Competing Interest StatementThe authors have declared no competing interest.