RT Journal Article SR Electronic T1 Engineering SARS-CoV-2 neutralizing antibodies for increased potency and reduced viral escape JF bioRxiv FD Cold Spring Harbor Laboratory SP 2022.01.06.475303 DO 10.1101/2022.01.06.475303 A1 Fangzhu Zhao A1 Celina Keating A1 Gabriel Ozorowski A1 Namir Shaabani A1 Irene M. Francino-Urdaniz A1 Shawn Barman A1 Oliver Limbo A1 Alison Burns A1 Panpan Zhou A1 Michael J. Ricciardi A1 Jordan Woehl A1 Quoc Tran A1 Hannah L. Turner A1 Linghang Peng A1 Deli Huang A1 David Nemazee A1 Raiees Andrabi A1 Devin Sok A1 John R. Teijaro A1 Timothy A. Whitehead A1 Andrew B. Ward A1 Dennis R. Burton A1 Joseph G. Jardine YR 2022 UL http://biorxiv.org/content/early/2022/01/07/2022.01.06.475303.abstract AB The rapid spread of SARS-CoV-2 variants poses a constant threat of escape from monoclonal antibody and vaccine countermeasures. Mutations in the ACE2 receptor binding site on the surface S protein have been shown to disrupt antibody binding and prevent viral neutralization. Here, we use a directed evolution-based approach to engineer three neutralizing antibodies for enhanced binding to S protein. The engineered antibodies showed increased in vitro functional activity in terms of neutralization potency and/or breadth of neutralization against viral variants. Deep mutational scanning revealed that higher binding affinity reduced the total number of viral escape mutations. Studies in the Syrian hamster model showed two examples where the affinity matured antibody provided superior protection compared to the parental antibody. These data suggest that monoclonal antibodies for anti-viral indications could benefit from in vitro affinity maturation to reduce viral escape pathways and appropriate affinity maturation in vaccine immunization could help resist viral variation.Competing Interest StatementJ.G.J., D.R.B., and F.Z. are listed as inventors on pending patent applications describing the engineered SARS-CoV-2 neutralizing antibodies.