RT Journal Article SR Electronic T1 Collateral cleavage of 28s rRNA by RfxCas13d causes death of mice JF bioRxiv FD Cold Spring Harbor Laboratory SP 2022.01.17.476700 DO 10.1101/2022.01.17.476700 A1 Yunfei Li A1 Junjie Xu A1 Xuefei Guo A1 Zhiwei Li A1 Lili Cao A1 Shengde Liu A1 Ying Guo A1 Guodong Wang A1 Yujie Luo A1 Zeming Zhang A1 Xuemei Wei A1 Yingchi Zhao A1 Tongtong Liu A1 Xiao Wang A1 Huawei Xia A1 Ming Kuang A1 Qirui Guo A1 Junhong Li A1 Luoying Chen A1 Yibing Wang A1 Qi Li A1 Fengchao Wang A1 Qinghua Liu A1 Fuping You YR 2022 UL http://biorxiv.org/content/early/2022/01/18/2022.01.17.476700.abstract AB The CRISPR-Cas13 system is an RNA-guided RNA-targeting system, and has been widely used in transcriptome engineering with potentially important clinical applications. However, it is still controversial whether Cas13 exhibits collateral activity in mammalian cells. Here, we found that knocking down gene expression using RfxCas13d in the adult brain neurons caused death of mice, which was not resulted from the loss of target gene function or off-target effects. Mechanistically, we showed that RfxCas13d exhibited collateral activity in mammalian cells, which is positively correlated with the abundance of target RNA. The collateral activity of RfxCas13d could cleave 28s rRNA into two fragments, leading to translation attenuation and activation of the ZAKα-JNK/p38-immediate early gene (IEG) pathway. These results provide new mechanistic insights into the collateral activity of RfxCas13d and warn that the biosafety of CRISPR-Cas13 system needs further evaluation before applying it to clinical treatments.Competing Interest StatementThe authors have declared no competing interest.