TY - JOUR T1 - DelaySSAToolkit.jl: stochastic simulation of reaction systems with time delays in Julia JF - bioRxiv DO - 10.1101/2022.01.21.477236 SP - 2022.01.21.477236 AU - Xiaoming Fu AU - Xinyi Zhou AU - Dongyang Gu AU - Zhixing Cao AU - Ramon Grima Y1 - 2022/01/01 UR - http://biorxiv.org/content/early/2022/01/23/2022.01.21.477236.abstract N2 - Summary DelaySSAToolkit.jl is a Julia package for modelling reaction systems with non-Markovian dynamics, specifically those with time delays. These delays implicitly capture multiple intermediate reaction steps and hence serve as an effective model reduction technique for complex systems in biology, chemistry, ecology and genetics. The package implements a variety of exact formulations of the delay stochastic simulation algorithm.Contact xmfu{at}ecust.edu.cn, zcao{at}ecust.edu.cn, or ramon.grima{at}ed.ac.ukAvailability and Implementation The source code and documentation of DelaySSAToolkit.jl are available at https://github.com/palmtree2013/DelaySSAToolkit.jl.Competing Interest StatementThe authors have declared no competing interest. ER -