PT  - JOURNAL ARTICLE
AU  - Agah Karakuzu
AU  - Labonny Biswas
AU  - Julien Cohen-Adad
AU  - Nikola Stikov
TI  - Vendor-neutral sequences and fully transparent workflows improve inter-vendor reproducibility of quantitative MRI
AID  - 10.1101/2021.12.27.474259
DP  - 2022 Jan 01
TA  - bioRxiv
PG  - 2021.12.27.474259
4099  - http://biorxiv.org/content/early/2022/04/18/2021.12.27.474259.short
4100  - http://biorxiv.org/content/early/2022/04/18/2021.12.27.474259.full
AB  - Purpose We developed an end-to-end workflow that starts with a vendor-neutral acquisition and tested the hypothesis that vendor-neutral sequences decrease inter-vendor variability of T1, MTR and MTsat measurements.Methods We developed and deployed a vendor-neutral 3D spoiled gradient-echo (SPGR) sequence on three clinical scanners by two MRI vendors. We then acquired T1 maps on the ISMRM-NIST system phantom, as well as T1, MTR and MTsat maps in three healthy participants. We performed hierarchical shift function analysis in vivo to characterize the differences between scanners when the vendor-neutral sequence is used instead of commercial vendor implementations. Inter-vendor deviations were compared for statistical significance to test the hypothesis.Results In the phantom, the vendor-neutral sequence reduced inter-vendor differences from 8 - 19.4% to 0.2 - 5% with an overall accuracy improvement, reducing ground truth T1 deviations from 7 - 11% to 0.2 - 4%. In vivo we found that the variability between vendors is significantly reduced (p = 0.015) for all maps (T1, MTR and MTsat) using the vendor-neutral sequence.Conclusion We conclude that vendor-neutral workflows are feasible and compatible with clinical MRI scanners. The significant reduction of inter-vendor variability using vendor-neutral sequences has important implications for qMRI research and for the reliability of multicenter clinical trials.Competing Interest StatementThe authors have declared no competing interest.