RT Journal Article SR Electronic T1 Cell-type specific innervation of cortical pyramidal cells at their apical tufts JF bioRxiv FD Cold Spring Harbor Laboratory SP 571695 DO 10.1101/571695 A1 Ali Karimi A1 Jan Odenthal A1 Florian Drawitsch A1 Kevin M. Boergens A1 Moritz Helmstaedter YR 2019 UL http://biorxiv.org/content/early/2019/03/15/571695.abstract AB We investigated the synaptic innervation of apical tufts of cortical pyramidal cells in a region between layers 1 and 2 using 3-D electron microscopy (3D-EM) applied to four cortical regions in mouse. Across all cortices, we found the relative inhibitory input at the apical dendrite’s main bifurcation to be more than 3-fold stronger for layer 2 pyramidal cells than for all other pyramidal cells. Towards the distal tuft dendrites in upper layer 1, however, the relative inhibitory input was about 2-fold stronger for L5 pyramidal cells than for all others. Only L3 pyramidal cells showed homogeneous inhibitory input density. The inhibitory to excitatory synaptic balance is thus specific for the types of pyramidal cells. Inhibitory axons preferentially innervated either layer 2 or L3/5 apical dendrites, but not both. These findings describe connectomic principles for the control of pyramidal cells at their apical dendrites in the upper layers of the cerebral cortex and point to differential computational properties of layer 2, layer 3 and layer 5 pyramidal cells in cortex.