PT  - JOURNAL ARTICLE
AU  - Bertil Wegmann
AU  - Anders Eklund
AU  - Mattias Villani
TI  - Bayesian non-central chi regression for neuroimaging
AID  - 10.1101/095844
DP  - 2016 Jan 01
TA  - bioRxiv
PG  - 095844
4099  - http://biorxiv.org/content/early/2016/12/21/095844.short
4100  - http://biorxiv.org/content/early/2016/12/21/095844.full
AB  - We propose a regression model for non-central χ (NC-χ) distributed functional magnetic resonance imaging (fMRI) and diffusion weighted imaging (DWI) data, with the heteroscedastic Rician regression model as a prominent special case. The model allows both parameters in the NC-χ distribution to be linked to explanatory variables, with the relevant covariates automatically chosen by Bayesian variable selection. A highly efficient Markov chain Monte Carlo (MCMC) algorithm is proposed for simulating from the joint Bayesian posterior distribution of all model parameters and the binary covariate selection indicators. Simulated fMRI data is used to demonstrate that the Rician model is able to localize brain activity much more accurately than the traditionally used Gaussian model at low signal-to-noise ratios. Using a diffusion dataset from the Human Connectome Project, it is also shown that the commonly used approximate Gaussian noise model underestimates the mean diffusivity (MD) and the fractional anisotropy (FA) in the single-diffusion tensor model compared to the theoretically correct Rician model.