RT Journal Article
SR Electronic
T1 3D Ground Truth Annotations of Nuclei in 3D Microscopy Volumes
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 2022.09.26.509542
DO 10.1101/2022.09.26.509542
A1 Alain Chen
A1 Liming Wu
A1 Seth Winfree
A1 Kenneth W. Dunn
A1 Paul Salama
A1 Edward J. Delp
YR 2022
UL http://biorxiv.org/content/early/2022/09/26/2022.09.26.509542.abstract
AB In this paper we describe a set of 3D microscopy volumes we have partially manually annotated. We describe the volumes annotated and the tools and processes we use to annotate the volumes. In addition, we provide examples of annotated subvolumes. We also provide synthetically generated 3D microscopy volumes that can be used for training segmentation methods. The full set of annotations, synthetically generated volumes, and original volumes can be accessed as described in the paper.Competing Interest StatementThe authors have declared no competing interest.