TY - JOUR T1 - Real-time spike sorting platform for high-density extracellular probes with ground-truth validation and drift correction JF - bioRxiv DO - 10.1101/101030 SP - 101030 AU - James J. Jun AU - Catalin Mitelut AU - Chongxi Lai AU - Sergey L. Gratiy AU - Costas A. Anastassiou AU - Timothy D. Harris Y1 - 2017/01/01 UR - http://biorxiv.org/content/early/2017/01/19/101030.abstract N2 - Electrical recordings from a large array of electrodes give us access to neural population activity with single-cell, single-spike resolution. These recordings contain extracellular spikes which must be correctly detected and assigned to individual neurons. Despite numerous spike-sorting techniques developed in the past, a lack of high-quality ground-truth datasets hinders the validation of spike-sorting approaches. Furthermore, existing approaches requiring manual corrections are not scalable for hours of recordings exceeding 100 channels. To address these issues, we built a comprehensive spike-sorting pipeline that performs reliably under noise and probe drift by incorporating a channel-covariance feature and a clustering based on fast density-peak finding. We validated performance of our workflow using multiple ground-truth datasets that recently became available. Our software scales linearly and processes a 1000-channel recording in real-time using a single workstation. Accurate, real-time spike sorting from large recording arrays will enable more precise control of closed-loop feedback experiments and brain-computer interfaces. ER -