PT - JOURNAL ARTICLE AU - Thi Yen Hang Bui AU - Elke De Zitter AU - Benjamien Moeyaert AU - Ludovic Pecqueur AU - Bindu Y Srinivasu AU - Anastassios Economou AU - Marc Fontecave AU - Luc Van Meervelt AU - Peter Dedecker AU - Brandán Pedre TI - Oxygen-induced chromophore degradation in the photoswitchable red fluorescent protein rsCherry AID - 10.1101/2023.01.13.523900 DP - 2023 Jan 01 TA - bioRxiv PG - 2023.01.13.523900 4099 - http://biorxiv.org/content/early/2023/01/13/2023.01.13.523900.short 4100 - http://biorxiv.org/content/early/2023/01/13/2023.01.13.523900.full AB - Reversibly switchable monomeric Cherry (rsCherry) is a photoswitchable variant of the red fluorescent protein mCherry. We report that this protein gradually and irreversibly loses its red fluorescence in the dark over a period of months at 4°C and a few days at 37°C. We also find that its ancestor, mCherry, undergoes a similar fluorescence loss but at a slower rate. X-ray crystallography and mass spectrometry reveal that this is caused by the cleavage of the p-hydroxyphenyl ring from the chromophore and the formation of two novel types of cyclic structures at the remaining chromophore moiety. Overall, our work sheds light on a new process occurring within fluorescent proteins, further adding to the chemical diversity and versatility of these molecules.Competing Interest StatementThe authors have declared no competing interest.