PT - JOURNAL ARTICLE AU - He Xu AU - Di Wu AU - Jin Xu AU - Yubin Lei AU - Yalan Lei AU - Xianjun Yu AU - Si Shi TI - Histone acetylation insulator SET orchestrates PP2A inhibition and super-enhancer activation AID - 10.1101/2023.01.15.524091 DP - 2023 Jan 01 TA - bioRxiv PG - 2023.01.15.524091 4099 - http://biorxiv.org/content/early/2023/01/17/2023.01.15.524091.short 4100 - http://biorxiv.org/content/early/2023/01/17/2023.01.15.524091.full AB - Wide-spread growth-essential genes are hyper-transcribed in the pancreatic cancer cells. Searching for the factors that reprogram this abnormal transcription, we identified the nuclear oncogene SET that supported CDK9-induced and Pol II-mediated transcription. SET disrupted PP2A-A/C interaction via its C-terminal domains. Through blocking PP2A activity, SET assisted CDK9 to maintain Pol II CTD phosphorylation and activated mRNA transcription. Meanwhile, as a histone acetylation insulator, SET mainly suppressed histone acetylation in the gene promoters but evaded enhancers. Massive super-enhancer associated genes, including the oncogene MET, were hence permitted to be transcribed by SET over-expression. Our findings position SET as a key factor that bridges histone acetylation and PP2A related transcription in cancer cells.Competing Interest StatementThe authors have declared no competing interest.