RT Journal Article SR Electronic T1 Single-Cell Map of Dynamic Multicellular Ecosystem of Radiation-Induced Intestinal Injury JF bioRxiv FD Cold Spring Harbor Laboratory SP 2023.03.06.531402 DO 10.1101/2023.03.06.531402 A1 Hua Yan A1 Hao Lu A1 Yuan Xing A1 Yumeng Ye A1 Siao Jiang A1 Luyu Ma A1 Hongyan Zuo A1 Yanhui Hao A1 Chao Yu A1 Yang Li A1 Yiming Lu A1 Gangqiao Zhou YR 2023 UL http://biorxiv.org/content/early/2023/03/07/2023.03.06.531402.abstract AB Intestine is a highly radiation-sensitive organ that could be injured during the radiotherapy for abdominal or pelvic cavity tumors. However, the dynamic change of the intestinal microenvironment related to radiation-induced intestine injury (RIII) is still unclear. Using single-cell RNA sequencing, we pictured a dynamic landscape of the intestinal microenvironment during RIII and regeneration. We showed that the multicellular ecosystem of intestine exhibited heterogeneous radiosensitivities. We revealed the distinct dynamic patterns of three subtypes of intestinal stem cells (ISCs), and the cellular trajectory analysis suggested a complex interconversion pattern among them. For the immune cells, we found that Ly6c+ monocytes can give rise to both pro-inflammatory macrophages and resident macrophages after RIII. Besides, through cellular communication analysis, we identified a positive feedback loop between the macrophages and endothelial cells, which could amplify the inflammatory response induced by radiation. Overall, our study provides a valuable single-cell map of the dynamic multicellular ecosystem during RIII and regeneration, which may facilitate the understanding of the mechanism of RIII.Competing Interest StatementThe authors have declared no competing interest.