RT Journal Article
SR Electronic
T1 The alternative polyadenylation regulator CFIm25 promotes macrophage differentiation and activates the NF-κβ pathway
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 2024.09.03.611136
DO 10.1101/2024.09.03.611136
A1 Mukherjee, Srimoyee
A1 Barua, Atish
A1 Wang, Luyang
A1 Tian, Bin
A1 Moore, Claire L.
YR 2024
UL http://biorxiv.org/content/early/2024/09/04/2024.09.03.611136.abstract
AB Macrophages are required for our body’s development and tissue repair and protect against microbial attacks. We previously reported a crucial role for regulation of mRNA 3’-end cleavage and polyadenylation (C/P) in monocyte to macrophage differentiation. The CFIm25 subunit of the C/P complex showed a striking increase upon differentiation of monocytes with Phorbol Myristate Acetate, suggesting that it promotes this process. To test this hypothesis, CFIm25 was overexpressed in two different monocytic cell lines, followed by differentiation. Both cell lines showed a significant increase in macrophage characteristics and an earlier slowing of the cell cycle. In contrast, depletion of CFIm25 hindered differentiation. Cell cycle slowing upon CFIm25 overexpression was consistent with a greater decrease in the proliferation markers PCNA and cyclin D1, coupled with increased 3’UTR lengthening of cyclin D1 mRNA. Since choice of other poly(A) sites could be affected by manipulating CFIm25, we identified additional genes with altered use of poly(A) sites during differentiation and examined how this changed upon CFIm25 overexpression. The mRNAs of positive regulators of NF-κB signaling, TAB2 and TBL1XR1, and NFKB1, which encodes the NF-κB p50 precursor, underwent 3’UTR shortening that was associated with increased protein expression compared to the control. Cells overexpressing CFIm25 also showed elevated levels of phosphorylated NF-κB-p65 and the NF-κB targets p21, Bcl-XL, ICAM1 and TNF-α at an earlier time and greater resistance to NF-κB chemical inhibition. In conclusion, our study supports a model in which CFIm25 accelerates the monocyte to macrophage transition by promoting alternative polyadenylation events which lead to activation of the NF-κB pathway.Competing Interest StatementThe authors have declared no competing interest.C/Pcleavage and polyadenylationPMAPhorbol Myristate AcetateAPAAlternative polyadenylationPASPoly(A) Site