RT Journal Article SR Electronic T1 Genetics of vaccination-related narcolepsy JF bioRxiv FD Cold Spring Harbor Laboratory SP 169623 DO 10.1101/169623 A1 Hanna M. Ollila A1 Annika Wennerstrom A1 Markku Partinen A1 Emmanuel Mignot A1 Janna Saarela A1 Turkka Kirjavainen A1 Christer Hublin A1 Logan D. Schneider A1 Sari-Leena Himanen A1 Outi Saarenpää-heikkilä A1 Paivi Saavalainen A1 Pentti J. Tienari A1 Outi Vaarala A1 Markus Perola YR 2017 UL http://biorxiv.org/content/early/2017/07/28/169623.abstract AB Narcolepsy type 1 is a severe hypersomnia affecting 1/3000 individuals. It is caused by a loss of neurons producing hypocretin/orexin in the hypothalamus. In 2009/2010, an immunization campaign directed towards the new pandemic H1N1 Influenza-A strain was launched and increased risk of narcolepsy reported in Northern European countries following vaccination with Pandemrix®, an adjuvanted H1N1 vaccine resulting in ~250 vaccination-related cases in Finland alone. Using whole genome sequencing data of 2000 controls, exome sequencing data of 5000 controls and HumanCoreExome chip genotypes of 81 cases with vaccination-related narcolepsy and 2796 controls, we, built a multilocus genetic risk score with established narcolepsy risk variants. We also analyzed, whether novel risk variants would explain vaccine-related narcolepsy. We found that previously discovered risk variants had strong predictive power (accuracy of 73% and P<2.2*10−16; and ROC curve AUC 0.88) in vaccine-related narcolepsy cases with only 4.9% of cases being assigned to the low risk category. Our findings indicate genetic predisposition to vaccine-triggered narcolepsy, with the possibility of identifying 95% of people at risk.