PT - JOURNAL ARTICLE AU - Bruno M. C. Martins AU - Amy K. Tooke AU - Philipp Thomas AU - James C. W. Locke TI - Cell size control driven by the circadian clock and environment in cyanobacteria AID - 10.1101/183558 DP - 2017 Jan 01 TA - bioRxiv PG - 183558 4099 - http://biorxiv.org/content/early/2017/11/20/183558.short 4100 - http://biorxiv.org/content/early/2017/11/20/183558.full AB - How cells maintain their size has been extensively studied under constant conditions. In the wild, however, cells rarely experience constant environments. Here, we examine how the 24-hour circadian clock and environmental cycles modulate cell size control and division timings in the cyanobacterium Synechococcus elongatus using single-cell time-lapse microscopy. Under constant light, wild type cells follow an apparent sizer-like principle. Closer inspection reveals that the clock generates two subpopulations, with cells born in the subjective day following different division rules from cells born in subjective night. A stochastic model explains how this behaviour emerges from the interaction of cell size control with the clock. We demonstrate that the clock continuously modulates the probability of cell division throughout day and night, rather than solely applying an on-off gate to division as previously proposed. Iterating between modelling and experiments, we go on to show that the combined effects of the environment and the clock on cell division are explained by an effective coupling function. Under naturally graded light-dark cycles, this coupling shifts cell division away from dusk and dawn, when light levels are low and cell growth is reduced. Our analysis allows us to disentangle, and predict the effects of, the complex interactions between the environment, clock, and cell size control.