PT  - JOURNAL ARTICLE
AU  - Handan Melike Dönertaş
AU  - Matías Fuentealba Valenzuela
AU  - Linda Partridge
AU  - Janet M. Thornton
TI  - Gene Expression-Based Drug Repurposing to Target Ageing
AID  - 10.1101/253344
DP  - 2018 Jan 01
TA  - bioRxiv
PG  - 253344
4099  - http://biorxiv.org/content/early/2018/01/24/253344.short
4100  - http://biorxiv.org/content/early/2018/01/24/253344.full
AB  - Ageing is the largest risk factor for a variety of non-communicable diseases. Model organism studies have shown that genetic and chemical perturbations can extend both life- and health-span. Ageing is a complex process, with parallel and interacting mechanisms contributing to its aetiology, posing a challenge for the discovery of new pharmacological candidates to ameliorate its effects. In this study, instead of a target-centric approach, we adopt a systems level drug repurposing methodology to discover drugs that could combat ageing in human brain. Using multiple gene expression datasets from brain tissue, taken from patients of different ages, we first identified the expression changes that characterise ageing. Then, we compared these changes in gene expression with drug perturbed expression profiles in the Connectivity Map. We thus identified 24 drugs with significantly associated changes. Some of these drugs may function as anti-ageing drugs by reversing the detrimental changes that occur during ageing, others by mimicking the cellular defense mechanisms. The drugs that we identified included significant number of already identified pro-longevity drugs, indicating that the method can discover de novo drugs that meliorate ageing. The approach has the advantages that, by using data from human brain ageing data it focuses on processes relevant in human ageing and that it is unbiased, making it possible to discover new targets for ageing studies.