PT  - JOURNAL ARTICLE
AU  - Schenck, Ryan O.
AU  - Kim, Eunjung
AU  - Bravo, Rafael R.
AU  - West, Jeffrey
AU  - Leedham, Simon
AU  - Shibata, Darryl
AU  - Anderson, Alexander R.A.
TI  - How Homeostasis Limits Keratinocyte Evolution
AID  - 10.1101/548131
DP  - 2019 Jan 01
TA  - bioRxiv
PG  - 548131
4099  - http://biorxiv.org/content/early/2019/06/25/548131.short
4100  - http://biorxiv.org/content/early/2019/06/25/548131.full
AB  - The skin is the largest human organ, functioning to serve as the protective barrier to the harsh, outside world. Recent studies have revealed that large numbers of somatic mutations accumulate, which can be used to infer normal human skin cell dynamics1-6. Here we present the first realistic mechanistic epidermal model, that uses the ‘Gattaca’ method to incorporate cell-genomes, that shows homeostasis imposes a characteristic log-linear subclone size distribution for both neutral and driver mutations, where the largest skin subclones are the oldest subclones. Because homeostasis inherently limits proliferation and therefore clonal sweeps, selection for driver mutations (NOTCH1 and TP53) in normal epidermis is instead conferred by greater persistence, which leads to larger subclone sizes. These results reveal how driver mutations may persist and expand in normal epidermis while highlighting how the integration of mechanistic modeling with genomic data provides novel insights into evolutionary cell dynamics of normal human homeostatic tissues.