RT Journal Article SR Electronic T1 Firefly genomes illuminate parallel origins of bioluminescence in beetles JF bioRxiv FD Cold Spring Harbor Laboratory SP 237586 DO 10.1101/237586 A1 Timothy R. Fallon A1 Sarah E. Lower A1 Ching-Ho Chang A1 Manabu Bessho-Uehara A1 Gavin J. Martin A1 Adam J. Bewick A1 Megan Behringer A1 Humberto J. Debat A1 Isaac Wong A1 John C. Day A1 Anton Suvorov A1 Christian J. Silva A1 Kathrin F. Stanger-Hall A1 David W. Hall A1 Robert J. Schmitz A1 David R. Nelson A1 Sara M. Lewis A1 Shuji Shigenobu A1 Seth M. Bybee A1 Amanda M. Larracuente A1 Yuichi Oba A1 Jing-Ke Weng YR 2018 UL http://biorxiv.org/content/early/2018/02/25/237586.abstract AB Fireflies and their fascinating luminous courtships have inspired centuries of scientific study. Today firefly luciferase is widely used in biotechnology, but the evolutionary origin of their bioluminescence remains unclear. To shed light on this long-standing question, we sequenced the genomes of two firefly species that diverged over 100 million-years-ago: the North American Photinus pyralis and Japanese Aquatica lateralis. We also sequenced the genome of a related click-beetle, the Caribbean Ignelater luminosus, with bioluminescent biochemistry near-identical to fireflies, but anatomically unique light organs, suggesting the intriguing but contentious hypothesis of parallel gains of bioluminescence. Our analyses support two independent gains of bioluminescence between fireflies and click-beetles, and provide new insights into the genes, chemical defenses, and symbionts that evolved alongside their luminous lifestyle.One Sentence Summary: Comparative analyses of the first linkage-group-resolution genomes of fireflies and related bioluminescent beetles address long-standing questions of the origin and evolution of bioluminescence and its associated traits.