RT Journal Article
SR Electronic
T1 The exon junction complex regulates the release and phosphorylation of paused RNA polymerase II
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 271544
DO 10.1101/271544
A1 Junaid Akhtar
A1 Nastasja Kreim
A1 Federico Marini
A1 Giriram Kumar Mohana
A1 Daniel Brune
A1 Harald Binder
A1 Jean-Yves Roignant
YR 2018
UL http://biorxiv.org/content/early/2018/02/25/271544.abstract
AB Promoter proximal pausing of RNA polymerase II (Pol II) is a widespread transcriptional regulatory step across metazoans. Here we find that the nuclear exon junction complex (pre-EJC) plays a critical and conserved role in this process. Depletion of pre-EJC subunits leads to a global decrease in Pol II pausing and to premature entry into elongation. This effect occurs, at least in part, via non-canonical recruitment of pre-EJC components at promoters. Failure to recruit the pre-EJC at promoters results in increased binding of the positive transcription elongation complex (P-TEFb) and in enhanced Pol II release. Notably, restoring pausing is sufficient to rescue exon skipping and the photoreceptor differentiation defect associated with depletion of pre-EJC components in vivo. We propose that the pre-EJC serves as an early transcriptional checkpoint to prevent premature entry into elongation, ensuring proper recruitment of RNA processing components that are necessary for exon definition.