RT Journal Article SR Electronic T1 Computationally guided high-throughput design of self-assembling drug nanoparticles JF bioRxiv FD Cold Spring Harbor Laboratory SP 786251 DO 10.1101/786251 A1 Daniel Reker A1 Yulia Rybakova A1 Ameya R. Kirtane A1 Ruonan Cao A1 Jee Won Yang A1 Natsuda Navamajiti A1 Apolonia Gardner A1 Rosanna M. Zhang A1 Tina Esfandiary A1 Johanna L’Heureux A1 Thomas von Erlach A1 Elena M. Smekalova A1 Dominique Leboeuf A1 Kaitlyn Hess A1 Aaron Lopes A1 Jaimie Rogner A1 Joy Collins A1 Siddartha M. Tamang A1 Keiko Ishida A1 Paul Chamberlain A1 DongSoo Yun A1 Abigail Lytoon-Jean A1 Christian K. Soule A1 Jaime H. Cheah A1 Alison M. Hayward A1 Robert Langer A1 Giovanni Traverso YR 2019 UL http://biorxiv.org/content/early/2019/09/30/786251.abstract AB Nanoformulations are transforming our capacity to effectively deliver and treat a myriad of conditions. However, many nanoformulation approaches still suffer from high production complexity and low drug loading. One potential solution relies on harnessing co-assembly of drugs and small molecular excipients to facilitate nanoparticle formation through solvent exchange without the need for chemical synthesis, generating nanoparticles with up to 95% drug loading. However, there is currently no understanding which of the millions of possible combinations of small molecules can result in the formation of these nanoparticles. Here we report the development of a high-throughput screening platform coupled to machine learning to enable the rapid evaluation of such nanoformulations. Our platform identified 101 novel self-assembling drug nanoparticles from 2.1 million pairings derived from 788 candidate drugs with one of 2686 excipients, spanning treatments for multiple diseases and often harnessing well-known food additives, vitamins, or approved drugs as carrier materials – with potential for accelerated approval and translation. Given their long-term stability and potential for clinical impact, we further characterize novel sorafenib-glycyrrhizin and terbinafine-taurocholic acid nanoparticles ex vivo and in vivo. We anticipate that this platform could accelerate the development of safer and more efficacious nanoformulations with high drug loadings for a wide range of therapeutics.