PT - JOURNAL ARTICLE AU - Velasco, Mary Grace M. AU - Zhang, Mengyang AU - Antonello, Jacopo AU - Yuan, Peng AU - Allgeyer, Edward S. AU - May, Dennis AU - M’Saad, Ons AU - Kidd, Phylicia AU - Barentine, Andrew E. S. AU - Greco, Valentina AU - Grutzendler, Jaime AU - Booth, Martin J. AU - Bewersdorf, Joerg TI - 3D super-resolution deep-tissue imaging in living mice AID - 10.1101/790212 DP - 2019 Jan 01 TA - bioRxiv PG - 790212 4099 - http://biorxiv.org/content/early/2019/10/02/790212.short 4100 - http://biorxiv.org/content/early/2019/10/02/790212.full AB - Stimulated emission depletion (STED) microscopy enables the three-dimensional (3D) visualization of dynamic nanoscale structures in living cells, offering unique insights into their organization. However, 3D-STED imaging deep inside biological tissue is obstructed by optical aberrations and light scattering. We present a STED system that overcomes these challenges. Through the combination of 2-photon excitation, adaptive optics, far-red emitting organic dyes, and a long-working distance water-immersion objective lens, our system achieves aberration-corrected 3D super-resolution imaging, which we demonstrate 164 µm deep in fixed mouse brain tissue and 76 µm deep in the brain of a living mouse.