RT Journal Article SR Electronic T1 Single cell map of the human ovarian cortex JF bioRxiv FD Cold Spring Harbor Laboratory SP 791343 DO 10.1101/791343 A1 Magdalena Wagner A1 Masahito Yoshihara A1 Iyadh Douagi A1 Anastasios Damdimopoulos A1 Sarita Panula A1 Sophie Petropoulos A1 Haojiang Lu A1 Karin Pettersson A1 Kerstin Palm A1 Shintaro Katayama A1 Outi Hovatta A1 Juha Kere A1 Fredrik Lanner A1 Pauliina Damdimopoulou YR 2019 UL http://biorxiv.org/content/early/2019/10/02/791343.abstract AB The human ovary orchestrates sex hormone production and undergoes monthly structural changes to release mature oocytes. The outer lining of the ovary (cortex) has a key role in defining fertility in women as it harbors the ovarian reserve. It has been postulated that putative oogonial stem cells exist in the ovarian cortex and that these can be captured by DDX4 antibody isolation. We analysed on a single cell level the transcriptome and cell surface antigen profiles of over 24,000 cells from high quality ovarian cortex samples from 21 patients. Our single cell mapping reveals transcriptional profiles of six main cell types; oocytes, granulosa cells, immune cells, endothelial cells, perivascular cells, and stromal cells. Cells captured by DDX4 antibody are perivascular cells, not oogonial stem cells. Our data does not support the existence of germline stem cells in adult human ovaries thereby reinforcing the dogma of a limited ovarian reserve.