PT  - JOURNAL ARTICLE
AU  - Eline M. Krijkamp
AU  - Fernando Alarid-Escudero
AU  - Eva A. Enns
AU  - Petros Pechlivanoglou
AU  - M.G. Myriam Hunink
AU  - Hawre J. Jalal
TI  - A Multidimensional Array Representation of State-Transition Model Dynamics
AID  - 10.1101/670612
DP  - 2019 Jan 01
TA  - bioRxiv
PG  - 670612
4099  - http://biorxiv.org/content/early/2019/10/15/670612.short
4100  - http://biorxiv.org/content/early/2019/10/15/670612.full
AB  - Cost-effectiveness analyses often rely on cohort state-transition models (cSTMs). The cohort trace is the primary outcome of cSTMs, which captures the proportion of the cohort in each health state over time (state occupancy). However, the cohort trace is an aggregated measure that does not capture the information about the specific transitions among the health states (transition dynamics). In practice, these transition dynamics are crucial in many applications, such as incorporating transition rewards or computing various epidemiological outcomes that could be used for model calibration and validation (e.g. disease incidence and lifetime risk). In this manuscript we propose modifying the transitional cSTMs cohort trace computation to compute and store cSTMs dynamics that capture both state occupancy and transition dynamics. This approach produces a multidimensional matrix from which both the state occupancy and the transition dynamics can be recovered. We highlight the advantages and potential applications of this approach with an example coded in R to facilitate the implementation of our method.