RT Journal Article
SR Electronic
T1 High quality genome sequence reveals the 12 pseudo-chromosomes of <em>Ganoderma boninense</em>
JF bioRxiv
FD Cold Spring Harbor Laboratory
SP 817510
DO 10.1101/817510
A1 Condro Utomo
A1 Zulfikar Achmad Tanjung
A1 Redi Aditama
A1 Rika Fithri Nurani Buana
A1 Antonius Dony Madu Pratomo
A1 Reno Tryono
A1 Tony Liwang
YR 2019
UL http://biorxiv.org/content/early/2019/10/24/817510.abstract
AB Ganoderma boninense is the dominant fungal pathogen in causing Basal Stem Rot (BSR) disease on oil palm. The whole genome of this fungus was sequenced using PacBio RS II platforms to gain the whole-genome shotgun libraries. These libraries were smoothed with Illumina Hiseq 4000 paired end sequencing to polish the genome assembly. Subsequently, a combination of Dovetail Chicago and HiC libraries with the HiRise assembly pipeline revealed the 12 pseudo-chromosomes of G. boninense. This is the first report of chromosomal-scale genome assembly for the most important fungal pathogen on oil palm.