RT Journal Article SR Electronic T1 Immune surveillance in clinical regression of pre-invasive squamous cell lung cancer JF bioRxiv FD Cold Spring Harbor Laboratory SP 833004 DO 10.1101/833004 A1 Adam Pennycuick A1 Vitor H. Teixeira A1 Khalid AbdulJabbar A1 Shan E Ahmed Raza A1 Tom Lund A1 Ayse Akarca A1 Rachel Rosenthal A1 Christodoulos P. Pipinikas A1 Henry Lee-Six A1 Deepak P. Chandrasekharan A1 Robert E. Hynds A1 Kate H. C. Gowers A1 Jake Y. Henry A1 Celine Denais A1 Mary Falzon A1 Sophia Antoniou A1 Pascal F. Durrenberger A1 Andrew Furness A1 Bernadette Carroll A1 Ricky M. Thakrar A1 Philip J. George A1 Teresa Marafioti A1 Charles Swanton A1 Christina Thirlwell A1 Peter J. Campbell A1 Yinyin Yuan A1 Sergio A. Quezada A1 Nicholas McGranahan A1 Sam M. Janes YR 2019 UL http://biorxiv.org/content/early/2019/11/10/833004.abstract AB Before squamous cell lung cancer develops, pre-cancerous lesions can be found in the airways. From longitudinal monitoring, we know that only half of such lesions become cancer, whereas a third spontaneously regress. While recent studies have described the presence of an active immune response in high-grade lesions, the mechanisms underpinning clinical regression of pre-cancerous lesions remain unknown. Here, we show that host immune surveillance is strongly implicated in lesion regression. Using bronchoscopic biopsies from human subjects, we find that regressive carcinoma in-situ lesions harbour more infiltrating immune cells than those that progress to cancer. Moreover, molecular profiling of these lesions identifies potential immune escape mechanisms specifically in those that progress to cancer: antigen presentation is impaired by genomic and epigenetic changes, TGF-beta signalling is overactive, and the immunomodulator TNFSF9 is downregulated. Changes appear intrinsic to the CIS lesions as the adjacent stroma of progressive and regressive lesions are transcriptomically similar. This study identifies mechanisms by which pre-cancerous lesions evade immune detection during the earliest stages of carcinogenesis and forms a basis for new therapeutic strategies that treat or prevent early stage lung cancer.