X Location	Reference	Polymorphism	Gene Effected	Type	Effect	Codon Change	Found in Genotypes	Allele Specificity	
6756681	A	T	CG14438	5' UTR	MODIFIER	none	"sov[EA42]/sov[2], sov[EA42]/Y"	sov[EA42]	
6757101	CTTTTTTTTTT	CTTTTTTTTTTT	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6757247	C	T	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6757270	A	AG	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6757370	ATTTTTT	ATTTTTTT	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6757453	G	C	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6757586	A	G	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6757697	C	T	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6757798	C	A	"CG14438, CR43496"	noncoding	MODIFIER	none	sov[ML150]/sov[2]	sov[ML150]	
6757957	G	C	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6758137	G	A	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6758171	CAA	CA	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[EA42]/Y"	sov[EA42]	
6758507	A	C	"CG14438, CR43496"	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6758928	T	C	CR43496	ncRNA	UNKNOWN	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	found in w[1118] RNAseq and OregonR DNAseq data
6759106	G	A	CR43496	ncRNA	UNKNOWN	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	found in w[1118] RNAseq and OregonR DNAseq data
6759107	T	C	CR43496	ncRNA	UNKNOWN	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	found in w[1118] RNAseq and OregonR DNAseq data
6760622	T	C	CG14438	missense	MODERATE	Leu157Pro	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6760640	T	A	CG14438	missense	MODERATE	Leu163Gln	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6761173	T	G	CG14438	missense	MODERATE	Leu341Val	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6761328	T	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6761346	T	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2]"	Unsure	
6761401	A	G	CG14438	missense	MODERATE	Ile417Val	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6761567	C	G	CG14438	missense	MODERATE	Ala472Gly	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6762104	C	A	CG14438	missense	MODERATE	Ala651Glu	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6762117	G	A	CG14438	synonymous	LOW	none	sov[ML150]/sov[2]	sov[ML150]	
6762188	A	G	CG14438	missense	MODERATE	Asn679Ser	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6762404	C	T	CG14438	missense	MODERATE	Pro751Leu	"sov[EA42]/sov[2], sov[EA42]/Y"	sov[EA42]	
6762559	G	C	CG14438	missense	MODERATE	Glu803Gln	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6762645	G	A	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6762869	G	A	CG14438	missense	MODERATE	Arg906Lys	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6763080	A	G	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6763087	C	A	CG14438	missense	MODERATE	Gln979Lys	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6763191	A	G	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6763488	C	T	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6763602	G	A	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6763655	C	G	CG14438	missense	MODERATE	Thr1168Ser	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6763761	T	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6763780	G	A	CG14438	missense	MODERATE	Asp1210Asn	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6763848	G	A	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6763888	C	G	CG14438	missense	MODERATE	Gln1246Glu	sov[ML150]/sov[2]	sov[ML150]	
6763925	T	C	CG14438	missense	MODERATE	Leu1258Pro	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6764082	G	A	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6764110	A	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6764300	C	T	CG14438	missense	MODERATE	Ala1383Val	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6764462	G	A	CG14438	nonsense	HIGH	none	"sov[EA42]/sov[2], sov[EA42]/Y"	sov[EA42]	
6765062	A	C	CG14438	missense	MODERATE	Gln1637Pro	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6765256	A	C	CG14438	missense	MODERATE	Ile1702Leu	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6765279	T	G	CG14438	missense	MODERATE	Ile1709Met	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6765424	C	A	CG14438	missense	MODERATE	Leu1758Met	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6765456	T	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6765876	C	T	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6766557	T	C	CG14438	synonymous	LOW	none	sov[ML150]/sov[2]	sov[ML150]	
6766700	C	T	CG14438	missense	MODERATE	Ser2183Leu	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6766882	C	T	CG14438	synonymous	LOW	none	sov[ML150]/sov[2]	sov[ML150]	
6769716	G	A	CG14438	missense	MODERATE	Asp3121Asn	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6769742	C	CT	CG14438	frameshift	HIGH	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6769916	C	T	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y"	Unsure	
6769925	T	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y"	Unsure	
6770130	T	C	CG14438	synonymous	LOW	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6770316	ATTTTTTTTTTTTTTT	ATTTTTTTTTTTTTT	CG14438	3' UTR	MODIFIER	none	"sov[ML150]/sov[2], sov[2]/Y"	Unsure	
6770467	C	T	CG14438	3' UTR	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6770470	C	T	CG14438	3' UTR	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6770783	A	G	CG14438	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous	
6770833	T	C	CG14438	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[2]/Y"	Unsure	
6770835	T	C	CG14438	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[2]/Y"	Unsure	
6770892	T	G	CG14438	noncoding	MODIFIER	none	sov[ML150]/sov[2]	sov[ML150]	
6770896	A	T	CG14438	noncoding	MODIFIER	none	sov[ML150]/sov[2]	sov[ML150]	
6770940	C	T	CG14438	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[2]/Y"	sov[2]	
6770970	A	G	CG14438	noncoding	MODIFIER	none	"sov[EA42]/sov[2], sov[ML150]/sov[2], sov[EA42]/Y, sov[2]/Y"	Unanimous