AdditionalFile19. RBH outliers in GeneSet_Nd-1_v2.0. AGI Position_in_Col-0 Nd-1_GeneID Position_in_Nd-1 Annotation(Araport11) AT1G33710 3039 NdChr1.g1277 1212 RNA-directed DNA polymerase (reverse transcriptase)-related family protein AT4G05180 15607 NdChr4.g19038 15531 photosystem II subunit Q-2 AT4G05400 15625 NdChr4.g19016 15513 copper ion binding protein AT1G40083 3221 NdChr1.g4027 3240 hypothetical protein AT4G05020 15590 NdChr4.g19057 15547 NAD(P)H dehydrogenase B2 AT3G61028 14867 NdChr3.g16861 13530 Putative endonuclease or glycosyl hydrolase AT4G04350 15527 NdChr4.g19152 15610 tRNA synthetase class I (I, L, M and V) family protein AT4G04980 15585 NdChr4.g19063 15552 hypothetical protein AT3G32280 13161 NdChr2.g10084 7907 ATP-dependent helicase family protein AT4G04450 15532 NdChr4.g19139 15605 WRKY family transcription factor AT4G04510 15538 NdChr4.g19132 15599 cysteine-rich RLK (RECEPTOR-like protein kinase) 38 AT2G01310 6448 NdChr3.g17481 14089 hypothetical protein AT4G04985 15586 NdChr4.g19062 15551 Eukaryotic aspartyl protease family protein AT4G04190 15518 NdChr4.g19177 15620 transmembrane protein AT2G03420 6643 NdChr2.g7956 6648 hypothetical protein AT4G05450 15630 NdChr4.g19011 15508 mitochondrial ferredoxin 1 AT4G04740 15558 NdChr4.g19100 15579 calcium-dependent protein kinase 23 AT4G05100 15599 NdChr4.g19046 15539 myb domain protein 74 AT4G04210 15520 NdChr4.g19175 15618 plant UBX domain containing protein 4 AT4G10680 15874 NdChr4.g20198 15875 transcription factor IIB (TFIIB) family protein AT4G04745 15559 NdChr4.g19096 15578 hypothetical protein AT1G71280 5493 NdChr1.g6742 5508 DEA(D/H)-box RNA helicase family protein AT2G33175 8708 NdChr1.g3600 3195 transmembrane protein AT4G05340 15620 NdChr4.g19021 15518 P-loop containing nucleoside triphosphate hydrolases superfamily protein AT4G05110 15600 NdChr4.g19045 15538 equilibrative nucleoside transporter 6 AT4G05220 15611 NdChr4.g19034 15527 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family AT4G04110 15516 NdChr4.g19187 15623 Toll-Interleukin-Resistance (TIR) domain family protein AT2G07310 6864 NdChr3.g16315 13198 hypothetical protein AT2G38210 9218 NdChr2.g11476 9220 putative PDX1-like protein 4 AT3G11591 11269 NdChr4.g21990 17489 bric-a-brac protein AT4G07325 15655 NdChr2.g8560 6878 replication-like protein AT3G01840 10295 NdChr3.g12596 10297 Protein kinase superfamily protein AT5G01080 18856 NdChr1.g2998 2797 Beta-galactosidase related protein AT4G04695 15553 NdChr4.g19106 15584 calcium-dependent protein kinase 31 AT4G04850 15568 NdChr4.g19080 15569 K efflux antiporter 3 AT2G35965 8992 NdChr4.g20080 15777 hypothetical protein AT1G32720 2968 NdChr2.g8964 6966 Cytochrome C oxidase polypeptide VIB family protein AT5G30495 21401 NdChr5.g26307 21395 Fcf2 pre-rRNA processing protein AT3G61030 14868 NdChr3.g16860 13529 Calcium-dependent lipid-binding (CaLB domain) family protein AT4G04500 15537 NdChr4.g19133 15600 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 AT3G61035 14869 NdChr3.g16859 13528 Cytochrome P450 superfamily protein AT4G04180 15517 NdChr4.g19178 15621 P-loop containing nucleoside triphosphate hydrolases superfamily protein AT3G42140 13175 NdChr5.g26695 21461 zinc ion binding / nucleic acid binding protein AT4G04340 15526 NdChr4.g19153 15611 ERD (early-responsive to dehydration stress) family protein AT4G04670 15551 NdChr4.g19109 15586 Met-10 like family protein / kelch repeat-containing protein AT4G04460 15533 NdChr4.g19137 15604 Saposin-like aspartyl protease family protein AT4G05440 15629 NdChr4.g19012 15509 temperature sensing protein-like protein AT4G04580 15542 NdChr4.g19124 15595 Homeodomain-like superfamily protein AT4G04770 15562 NdChr4.g19093 15575 ATP binding cassette protein 1 AT3G32050 13160 NdChr2.g8238 6822 hypothetical protein AT3G43890 13251 NdChr1.g6514 5290 Cysteine/Histidine-rich C1 domain family protein AT3G42990 13198 NdChr5.g26363 21403 hypothetical protein AT5G15420 20198 NdChr1.g4331 3407 hypothetical protein AT4G05350 15621 NdChr4.g19020 15517 RING/U-box superfamily protein AT4G33310 18168 NdChr2.g9131 7058 hypothetical protein AT4G23150 17130 NdChr4.g21613 17128 cysteine-rich RLK (RECEPTOR-like protein kinase) 7 AT4G04260 15522 NdChr4.g19172 15616 Bromo-adjacent homology (BAH) domain-containing protein AT4G07835 15662 NdChr5.g29492 23958 hypothetical protein AT4G04555 15540 NdChr4.g19130 15597 Myb family transcription factor AT4G04970 15583 NdChr4.g19065 15554 glucan synthase-like 1 AT4G04860 15569 NdChr4.g19079 15568 DERLIN-2.2 AT4G04900 15574 NdChr4.g19074 15563 ROP-interactive CRIB motif-containing protein 10 AT2G34110 8802 NdChr2.g11040 8807 hypothetical protein AT5G66380 24442 NdChr4.g22038 17530 folate transporter 1 AT4G04025 15512 NdChr4.g19208 15629 transcription repressor AT4G04800 15565 NdChr4.g19089 15572 methionine sulfoxide reductase B3 AT4G04370 15529 NdChr4.g19150 15608 Tetratricopeptide repeat (TPR)-like superfamily protein AT4G04470 15534 NdChr4.g19136 15603 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein AT4G04265 15523 NdChr4.g19171 15615 PttA/En/Spm family plant transposase AT4G04640 15549 NdChr4.g19113 15588 ATPase, F1 complex, gamma subunit protein AT1G80940 6422 NdChr1.g3144 2911 Snf1 kinase interactor-like protein AT4G05040 15592 NdChr4.g19055 15545 ankyrin repeat family protein AT3G01345 10243 NdChr3.g15720 13114 Expressed protein AT4G04760 15561 NdChr4.g19094 15576 Major facilitator superfamily protein AT4G04570 15541 NdChr4.g19125 15596 cysteine-rich RLK (RECEPTOR-like protein kinase) 40 AT1G47657 3412 NdChr5.g26640 21437 hypothetical protein AT3G60980 14865 NdChr3.g16865 13532 Tetratricopeptide repeat (TPR)-like superfamily protein AT4G04880 15571 NdChr4.g19077 15566 adenosine/AMP deaminase family protein AT4G05475 15633 NdChr4.g19008 15505 RNI-like superfamily protein AT4G05360 15622 NdChr4.g19019 15516 Zinc knuckle (CCHC-type) family protein AT4G04885 15572 NdChr4.g19076 15565 PCF11P-similar protein 4 AT4G19240 16767 NdChr5.g26783 21510 hypothetical protein AT4G05470 15632 NdChr4.g19009 15506 RNI-like superfamily protein AT4G05200 15609 NdChr4.g19036 15529 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 AT3G41762 13171 NdChr2.g8286 6839 hypothetical protein AT3G26430 12808 NdChr3.g15288 12810 GDSL-like Lipase/Acylhydrolase superfamily protein AT2G06667 6841 NdChr1.g3817 3224 transposase-associated domain protein AT4G05160 15605 NdChr4.g19040 15533 AMP-dependent synthetase and ligase family protein AT4G07820 15661 NdChr4.g19749 15662 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein AT3G14670 11608 NdChr3.g16217 13177 hypothetical protein AT2G34100 8803 NdChr2.g11039 8806 nonsense-mediated mRNA decay-like protein AT4G04870 15570 NdChr4.g19078 15567 cardiolipin synthase AT4G03830 15507 NdChr4.g19246 15635 hypothetical protein (Protein of unknown function, DUF601) AT4G03740 15505 NdChr4.g19786 15668 hypothetical protein AT3G21960 12355 NdChr3.g14783 12353 Receptor-like protein kinase-related family protein AT5G10336 19744 NdChr3.g18216 14793 hypothetical protein AT4G04972 15584 NdChr4.g19064 15553 hypothetical protein AT2G38195 9217 NdChr2.g11477 9221 RING/U-box superfamily protein AT4G05070 15594 NdChr4.g19051 15543 Wound-responsive family protein AT4G04360 15528 NdChr4.g19151 15609 transmembrane protein, putative (DUF1068) AT5G37440 21592 NdChr5.g26952 21620 Chaperone DnaJ-domain superfamily protein AT3G31550 13159 NdChr1.g3929 3227 replication protein A1 AT4G04404 15531 NdChr4.g19144 15606 C2H2 and C2HC zinc fingers superfamily protein AT4G04650 15550 NdChr4.g19112 15587 RNA-directed DNA polymerase (reverse transcriptase)-related family protein AT4G04402 15530 NdChr4.g19145 15607 two-component phosphorelay mediator AT4G05460 15631 NdChr4.g19010 15507 RNI-like superfamily protein AT4G04080 15514 NdChr4.g19199 15626 ISCU-like 3 AT4G04710 15555 NdChr4.g19103 15582 calcium-dependent kinase-like protein AT1G34070 3068 NdChr1.g4171 3289 Copia-like polyprotein/retrotransposon AT4G04890 15573 NdChr4.g19075 15564 protodermal factor 2 AT2G16290 7087 NdChr2.g9188 7095 F-box SKIP23-like protein (DUF295) AT4G03965 15510 NdChr4.g19218 15631 RING/U-box superfamily protein AT4G04490 15536 NdChr4.g19134 15601 cysteine-rich RLK (RECEPTOR-like protein kinase) 36 AT2G10440 6877 NdChr3.g15775 13132 mediator of RNA polymerase II transcription subunit AT4G04690 15552 NdChr4.g19108 15585 F-box and associated interaction domains-containing protein AT4G05170 15606 NdChr4.g19039 15532 basic helix-loop-helix (bHLH) DNA-binding superfamily protein AT2G45403 9944 NdChr5.g24283 19678 hypothetical protein AT3G60960 14862 NdChr3.g16857 13527 Tetratricopeptide repeat (TPR)-like superfamily protein AT4G04775 15563 NdChr4.g19092 15574 zinc ion binding protein AT3G60966 14863 NdChr3.g16853 13526 RING/U-box superfamily protein AT4G03820 15506 NdChr4.g19249 15636 transmembrane protein, putative (DUF3537) AT4G03940 15508 NdChr4.g19227 15633 transmembrane protein AT4G04960 15582 NdChr4.g19066 15555 Concanavalin A-like lectin protein kinase family protein AT1G46696 3360 NdChr4.g20561 16173 hypothetical protein (Protein of unknown function, DUF601) AT4G05060 15593 NdChr4.g19052 15544 PapD-like superfamily protein AT5G17167 20375 NdChr3.g15838 13145 nucleic acid-binding, OB-fold-like protein AT4G05380 15623 NdChr4.g19018 15515 P-loop nucleoside triphosphate hydrolase superfamily protein AT4G04090 15515 NdChr4.g19198 15625 BTB/POZ domain-containing protein AT4G05410 15626 NdChr4.g19015 15512 Transducin/WD40 repeat-like superfamily protein AT4G04700 15554 NdChr4.g19105 15583 calcium-dependent protein kinase 27 AT3G57587 14540 NdChr5.g29460 23929 Ta11-like non-LTR retrotransposon AT4G04620 15546 NdChr4.g19116 15591 Ubiquitin-like superfamily protein AT5G34581 21429 NdChr4.g19672 15661 hydroxyproline-rich glycoprotein family protein AT3G31430 13158 NdChr1.g3170 2935 zinc knuckle (CCHC-type) family protein AT5G32590 21412 NdChr1.g3969 3228 myosin heavy chain-like protein AT4G05260 15615 NdChr4.g19030 15523 Ubiquitin-like superfamily protein AT2G45000 9908 NdChr2.g12195 9910 structural constituent of nuclear pore AT1G19260 1817 NdChr1.g4014 3235 TTF-type zinc finger protein with HAT dimerization domain-containing protein AT4G05140 15603 NdChr4.g19042 15535 Nucleoside transporter family protein AT3G60975 14864 NdChr3.g16866 13533 hypothetical protein AT4G04950 15579 NdChr4.g19069 15558 thioredoxin family protein AT4G10660 15873 NdChr4.g20199 15876 CDC68-like protein AT4G04955 15580 NdChr4.g19068 15557 allantoinase AT1G67020 5058 NdChr3.g16266 13186 transmembrane protein AT3G61010 14866 NdChr3.g16864 13531 Ferritin/ribonucleotide reductase-like family protein AT4G04957 15581 NdChr4.g19067 15556 RRM in demeter (DUF1985) AT4G04790 15564 NdChr4.g19090 15573 Tetratricopeptide repeat (TPR)-like superfamily protein AT2G03410 6644 NdChr2.g7955 6647 Mo25 family protein AT5G64687 24268 NdChr5.g29872 24329 ubiquinol oxidase AT4G04930 15577 NdChr4.g19071 15560 fatty acid desaturase family protein AT4G03495 15487 NdChr4.g18985 15486 hypothetical protein AT2G09388 6873 NdChr5.g26338 21396 hypothetical protein AT3G28918 13046 NdChr1.g4308 3392 hypothetical protein AT4G03490 15488 NdChr4.g18984 15485 Ankyrin repeat family protein AT4G04540 15539 NdChr4.g19131 15598 cysteine-rich RLK (RECEPTOR-like protein kinase) 39 AT4G20953 16898 NdChr3.g13108 10783 hypothetical protein AT4G04730 15557 NdChr4.g19101 15580 Ta11-like non-LTR retrotransposon AT4G05010 15589 NdChr4.g19059 15548 F-box family protein AT4G05390 15624 NdChr4.g19017 15514 root FNR 1 AT3G43682 13237 NdChr4.g19181 15622 hypothetical protein AT4G19270 16768 NdChr2.g10110 7929 hypothetical protein AT2G19365 7365 NdChr1.g784 746 Myb/SANT-like DNA-binding domain protein AT5G27070 21252 NdChr5.g25952 21241 AGAMOUS-like 53 AT5G27260 21264 NdChr5.g26776 21505 Myb/SANT-like DNA-binding domain protein AT4G04632 15548 NdChr4.g19114 15589 Protein kinase superfamily protein AT4G04630 15547 NdChr4.g19115 15590 senescence regulator (Protein of unknown function, DUF584) AT4G05250 15614 NdChr4.g19031 15524 Ubiquitin-like superfamily protein AT2G07200 6860 NdChr3.g16220 13178 Cysteine proteinases superfamily protein AT4G04480 15535 NdChr4.g19135 15602 F-box protein with a domain protein AT4G05150 15604 NdChr4.g19041 15534 Octicosapeptide/Phox/Bem1p family protein AT1G03940 291 NdChr1.g263 252 HXXXD-type acyl-transferase family protein AT4G04220 15521 NdChr4.g19174 15617 receptor like protein 46 AT4G05090 15596 NdChr4.g19048 15541 Inositol monophosphatase family protein AT4G05310 15617 NdChr4.g19024 15521 Ubiquitin-like superfamily protein AT4G05095 15597 NdChr4.g19047 15540 non-LTR retrolelement reverse transcriptase AT4G05097 15598 NdChr2.g8463 6872 hypothetical protein AT4G04020 15511 NdChr4.g19209 15630 fibrillin AT5G28780 21383 NdChr3.g15919 13152 PIF1 helicase AT4G04940 15578 NdChr4.g19070 15559 transducin family protein / WD-40 repeat family protein AT2G44993 9907 NdChr2.g12196 9911 hypothetical protein AT4G05497 15635 NdChr4.g19006 15503 RNI-like superfamily protein AT1G63570 4720 NdChr3.g16553 13312 Receptor-like protein kinase-related family protein AT4G05490 15634 NdChr4.g19007 15504 RNI-like superfamily protein AT4G03960 15509 NdChr4.g19219 15632 Phosphotyrosine protein phosphatases superfamily protein AT4G04920 15576 NdChr4.g19072 15561 sensitive to freezing 6 AT3G43837 13247 NdChr4.g19229 15634 reverse transcriptase-like protein AT5G30341 21400 NdChr5.g26400 21404 hypothetical protein AT4G05430 15628 NdChr4.g19013 15510 Carbohydrate-binding X8 domain superfamily protein AT4G04720 15556 NdChr4.g19102 15581 calcium-dependent protein kinase 21 AT1G40087 3222 NdChr4.g19197 15624 Plant transposase (Ptta/En/Spm family) AT4G05000 15588 NdChr4.g19060 15549 Vacuolar protein sorting-associated protein VPS28 family protein AT4G04330 15525 NdChr4.g19154 15612 Chaperonin-like RbcX protein AT5G38010 21644 NdChr5.g26977 21641 UDP-Glycosyltransferase superfamily protein AT4G05190 15608 NdChr4.g19037 15530 kinesin 5 AT4G04605 15543 NdChr4.g19119 15594 Myb-like DNA-binding domain protein AT3G44261 13286 NdChr2.g8852 6920 Pol polyprotein/retrotransposon AT4G05240 15613 NdChr4.g19032 15525 Ubiquitin-like superfamily protein AT3G31350 13157 NdChr1.g4072 3253 hypothetical protein AT1G24380 2309 NdChr2.g8896 6941 no-apical-meristem-associated carboxy-terminal domain protein AT2G12205 6901 NdChr1.g4235 3334 hypothetical protein AT4G05120 15601 NdChr4.g19044 15537 Major facilitator superfamily protein AT3G47680 13569 NdChr3.g13881 11518 DNA binding protein AT4G05080 15595 NdChr4.g19049 15542 F-box and associated interaction domains-containing protein AT2G03567 6658 NdChr2.g8907 6947 hypothetical protein AT4G05320 15618 NdChr4.g19023 15520 polyubiquitin 10 AT4G23160 17131 NdChr3.g16495 13277 cysteine-rich RECEPTOR-like kinase AT1G71370 5501 NdChr1.g6734 5500 DEA(D/H)-box RNA helicase family protein AT5G39775 21806 NdChr4.g20147 15832 Gag-Pol polyprotein/retrotransposon AT1G60720 4443 NdChr4.g21951 17451 RNA-directed DNA polymerase (reverse transcriptase)-related family protein AT4G04830 15566 NdChr4.g19082 15571 methionine sulfoxide reductase B5 AT3G13240 11452 NdChr1.g1154 1096 hypothetical protein AT4G16860 16524 NdChr4.g20951 16528 Disease resistance protein (TIR-NBS-LRR class) family AT2G22340 7661 NdChr1.g4059 3247 transmembrane protein AT4G04910 15575 NdChr4.g19073 15562 AAA-type ATPase family protein AT4G04320 15524 NdChr4.g19155 15613 malonyl-CoA decarboxylase family protein AT4G05420 15627 NdChr4.g19014 15511 damaged DNA binding protein 1A AT4G04610 15544 NdChr4.g19118 15593 APS reductase 1 AT4G04614 15545 NdChr4.g19117 15592 hypothetical protein AT2G07641 6869 NdChr1.g3871 3225 hypothetical protein AT4G05030 15591 NdChr4.g19056 15546 Copper transport protein family AT4G04750 15560 NdChr4.g19095 15577 Major facilitator superfamily protein AT4G04200 15519 NdChr4.g19176 15619 Microsomal signal peptidase 25 kDa subunit (SPC25) AT1G47660 3413 NdChr1.g4487 3538 hypothetical protein AT4G04990 15587 NdChr4.g19061 15550 serine/arginine repetitive matrix-like protein (DUF761) AT4G05330 15619 NdChr4.g19022 15519 ARF-GAP domain 13 AT4G05270 15616 NdChr4.g19029 15522 Ubiquitin-like superfamily protein AT4G04040 15513 NdChr4.g19206 15627 Phosphofructokinase family protein AT4G05130 15602 NdChr4.g19043 15536 equilibrative nucleoside transporter 4 AT3G54730 14256 NdChr4.g19207 15628 transcription repressor AT4G20700 16874 NdChr5.g27173 21803 RNA-binding; reverse transcriptase, putative (DUF1204) AT4G05230 15612 NdChr4.g19033 15526 Ubiquitin-like superfamily protein AT4G05210 15610 NdChr4.g19035 15528 Trimeric LpxA-like enzymes superfamily protein AT1G79170 6255 NdChr1.g227 219 transmembrane protein AT1G52950 3895 NdChr2.g9009 6983 Nucleic acid-binding, OB-fold-like protein AT4G16890 16525 NdChr4.g20949 16527 TIR-NBS-LRR class disease resistance protein AT2G07732 6870 NdChr1.g3876 3226 Ribulose bisphosphate carboxylase large chain, catalytic domain-containing protein AT2G10975 6888 NdChr3.g14741 12316 hypothetical protein AT1G51172 3720 NdChr5.g25640 20970 hypothetical protein AT5G18880 20538 NdChr3.g18158 14738 RNA-directed DNA polymerase (reverse transcriptase)-related family protein AT1G40129 3223 NdChr4.g19160 15614 hypothetical protein AT4G08190 15675 NdChr2.g8046 6717 P-loop containing nucleoside triphosphate hydrolases superfamily protein AT4G04840 15567 NdChr4.g19081 15570 methionine sulfoxide reductase B6